Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ercc3P49135 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ercc3P49135 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ercc3P49135 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.16■□□□□ 0.66
Ercc3P49135 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Ercc3P49135 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ercc3P49135 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.16■□□□□ 0.66
Ercc3P49135 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.16■□□□□ 0.66
Ercc3P49135 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ercc3P49135 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ercc3P49135 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Ercc3P49135 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Ercc3P49135 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ercc3P49135 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ercc3P49135 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.16■□□□□ 0.66
Ercc3P49135 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.15■□□□□ 0.66
Ercc3P49135 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.15■□□□□ 0.66
Ercc3P49135 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
Ercc3P49135 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Ercc3P49135 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc3P49135 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc3P49135 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.15■□□□□ 0.66
Ercc3P49135 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.15■□□□□ 0.66
Ercc3P49135 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.15■□□□□ 0.66
Ercc3P49135 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc3P49135 Gm27357-201ENSMUST00000183754 135 ntBASIC19.15■□□□□ 0.66
Ercc3P49135 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc3P49135 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.15■□□□□ 0.66
Ercc3P49135 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc3P49135 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc3P49135 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc3P49135 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc3P49135 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc3P49135 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc3P49135 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc3P49135 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ercc3P49135 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc3P49135 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc3P49135 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ercc3P49135 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Ercc3P49135 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.15■□□□□ 0.66
Ercc3P49135 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ercc3P49135 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ercc3P49135 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ercc3P49135 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ercc3P49135 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ercc3P49135 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ercc3P49135 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ercc3P49135 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.14■□□□□ 0.65
Ercc3P49135 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.14■□□□□ 0.65
Ercc3P49135 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.14■□□□□ 0.65
Ercc3P49135 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.14■□□□□ 0.65
Ercc3P49135 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ercc3P49135 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ercc3P49135 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ercc3P49135 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ercc3P49135 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ercc3P49135 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ercc3P49135 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.14■□□□□ 0.65
Ercc3P49135 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ercc3P49135 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ercc3P49135 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ercc3P49135 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ercc3P49135 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ercc3P49135 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.13■□□□□ 0.65
Ercc3P49135 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ercc3P49135 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ercc3P49135 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ercc3P49135 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ercc3P49135 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.13■□□□□ 0.65
Ercc3P49135 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ercc3P49135 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.13■□□□□ 0.65
Ercc3P49135 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.13■□□□□ 0.65
Ercc3P49135 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.13■□□□□ 0.65
Ercc3P49135 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Ercc3P49135 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
Ercc3P49135 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.13■□□□□ 0.65
Ercc3P49135 Gm18669-201ENSMUST00000216049 778 ntBASIC19.13■□□□□ 0.65
Ercc3P49135 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ercc3P49135 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ercc3P49135 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ercc3P49135 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ercc3P49135 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ercc3P49135 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ercc3P49135 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Ercc3P49135 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ercc3P49135 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ercc3P49135 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ercc3P49135 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ercc3P49135 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ercc3P49135 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.12■□□□□ 0.65
Ercc3P49135 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ercc3P49135 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ercc3P49135 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ercc3P49135 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.12■□□□□ 0.65
Ercc3P49135 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ercc3P49135 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ercc3P49135 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ercc3P49135 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ercc3P49135 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms