Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rfx2P48379 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rfx2P48379 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.93■□□□□ 0.3
Rfx2P48379 Gm43347-201ENSMUST00000200226 580 ntBASIC16.93■□□□□ 0.3
Rfx2P48379 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.93■□□□□ 0.3
Rfx2P48379 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rfx2P48379 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx2P48379 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.93■□□□□ 0.3
Rfx2P48379 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rfx2P48379 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rfx2P48379 Gm13312-201ENSMUST00000119631 718 ntBASIC16.92■□□□□ 0.3
Rfx2P48379 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.92■□□□□ 0.3
Rfx2P48379 Gm27459-201ENSMUST00000184860 107 ntBASIC16.92■□□□□ 0.3
Rfx2P48379 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.92■□□□□ 0.3
Rfx2P48379 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rfx2P48379 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx2P48379 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx2P48379 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx2P48379 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx2P48379 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rfx2P48379 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx2P48379 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx2P48379 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx2P48379 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx2P48379 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx2P48379 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx2P48379 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx2P48379 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx2P48379 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Rfx2P48379 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx2P48379 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx2P48379 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx2P48379 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Rfx2P48379 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rfx2P48379 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx2P48379 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx2P48379 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx2P48379 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx2P48379 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
Rfx2P48379 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Rfx2P48379 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.9■□□□□ 0.3
Rfx2P48379 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.9■□□□□ 0.3
Rfx2P48379 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.9■□□□□ 0.3
Rfx2P48379 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rfx2P48379 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx2P48379 Mir8098-201ENSMUST00000184011 137 ntBASIC16.9■□□□□ 0.3
Rfx2P48379 Gm44430-201ENSMUST00000203376 995 ntBASIC16.9■□□□□ 0.3
Rfx2P48379 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.9■□□□□ 0.3
Rfx2P48379 Mzt1-203ENSMUST00000227948 952 ntBASIC16.9■□□□□ 0.3
Rfx2P48379 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx2P48379 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.9■□□□□ 0.3
Rfx2P48379 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx2P48379 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx2P48379 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx2P48379 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rfx2P48379 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx2P48379 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.9■□□□□ 0.3
Rfx2P48379 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rfx2P48379 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx2P48379 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx2P48379 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Rfx2P48379 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
Rfx2P48379 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx2P48379 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
Rfx2P48379 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms