Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.42■□□□□ 0.22
Vps4bP46467 Gm13559-201ENSMUST00000120476 863 ntBASIC16.42■□□□□ 0.22
Vps4bP46467 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4bP46467 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4bP46467 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.42■□□□□ 0.22
Vps4bP46467 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4bP46467 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4bP46467 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.42■□□□□ 0.22
Vps4bP46467 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4bP46467 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4bP46467 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4bP46467 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4bP46467 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4bP46467 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4bP46467 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.41■□□□□ 0.22
Vps4bP46467 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.41■□□□□ 0.22
Vps4bP46467 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.41■□□□□ 0.22
Vps4bP46467 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps4bP46467 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.4■□□□□ 0.22
Vps4bP46467 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4bP46467 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4bP46467 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4bP46467 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Vps4bP46467 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.4■□□□□ 0.22
Vps4bP46467 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Vps4bP46467 Gm26039-201ENSMUST00000158152 144 ntBASIC16.4■□□□□ 0.22
Vps4bP46467 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.4■□□□□ 0.22
Vps4bP46467 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.4■□□□□ 0.22
Vps4bP46467 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.4■□□□□ 0.22
Vps4bP46467 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4bP46467 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4bP46467 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4bP46467 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4bP46467 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4bP46467 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.4■□□□□ 0.22
Vps4bP46467 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4bP46467 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps4bP46467 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Vps4bP46467 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Vps4bP46467 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Vps4bP46467 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4bP46467 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.39■□□□□ 0.21
Vps4bP46467 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4bP46467 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4bP46467 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.39■□□□□ 0.21
Vps4bP46467 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4bP46467 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4bP46467 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4bP46467 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4bP46467 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.39■□□□□ 0.21
Vps4bP46467 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4bP46467 Mir5130-201ENSMUST00000175160 84 ntBASIC16.39■□□□□ 0.21
Vps4bP46467 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.39■□□□□ 0.21
Vps4bP46467 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.39■□□□□ 0.21
Vps4bP46467 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4bP46467 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.39■□□□□ 0.21
Vps4bP46467 Gm10566-201ENSMUST00000086739 996 ntBASIC16.39■□□□□ 0.21
Vps4bP46467 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4bP46467 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4bP46467 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps4bP46467 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4bP46467 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4bP46467 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4bP46467 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Vps4bP46467 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4bP46467 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps4bP46467 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Vps4bP46467 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Vps4bP46467 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Vps4bP46467 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.38■□□□□ 0.21
Vps4bP46467 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps4bP46467 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.38■□□□□ 0.21
Vps4bP46467 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms