Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl12P40224 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Cxcl12P40224 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
Cxcl12P40224 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl12P40224 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.63■□□□□ 0.25
Cxcl12P40224 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl12P40224 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cxcl12P40224 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl12P40224 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl12P40224 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl12P40224 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl12P40224 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cxcl12P40224 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.62■□□□□ 0.25
Cxcl12P40224 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cxcl12P40224 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.62■□□□□ 0.25
Cxcl12P40224 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 Gm13365-201ENSMUST00000121188 973 ntBASIC16.62■□□□□ 0.25
Cxcl12P40224 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.62■□□□□ 0.25
Cxcl12P40224 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cxcl12P40224 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cxcl12P40224 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Cxcl12P40224 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl12P40224 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl12P40224 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl12P40224 Gm8344-201ENSMUST00000119813 856 ntBASIC16.61■□□□□ 0.25
Cxcl12P40224 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.61■□□□□ 0.25
Cxcl12P40224 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl12P40224 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl12P40224 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl12P40224 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl12P40224 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.61■□□□□ 0.25
Cxcl12P40224 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cxcl12P40224 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cxcl12P40224 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl12P40224 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl12P40224 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl12P40224 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl12P40224 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl12P40224 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl12P40224 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.6■□□□□ 0.25
Cxcl12P40224 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl12P40224 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.6■□□□□ 0.25
Cxcl12P40224 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.6■□□□□ 0.25
Cxcl12P40224 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.6■□□□□ 0.25
Cxcl12P40224 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl12P40224 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl12P40224 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.6■□□□□ 0.25
Cxcl12P40224 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl12P40224 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl12P40224 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cxcl12P40224 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cxcl12P40224 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cxcl12P40224 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl12P40224 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl12P40224 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl12P40224 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.6■□□□□ 0.25
Cxcl12P40224 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl12P40224 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl12P40224 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cxcl12P40224 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl12P40224 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl12P40224 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl12P40224 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.59■□□□□ 0.25
Cxcl12P40224 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl12P40224 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.59■□□□□ 0.25
Cxcl12P40224 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl12P40224 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl12P40224 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.59■□□□□ 0.25
Cxcl12P40224 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.59■□□□□ 0.25
Cxcl12P40224 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl12P40224 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl12P40224 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.59■□□□□ 0.25
Cxcl12P40224 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl12P40224 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl12P40224 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl12P40224 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl12P40224 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl12P40224 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl12P40224 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.59■□□□□ 0.25
Cxcl12P40224 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cxcl12P40224 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.59■□□□□ 0.25
Cxcl12P40224 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cxcl12P40224 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cxcl12P40224 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cxcl12P40224 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms