Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm9731-201ENSMUST00000209480 747 ntBASIC16.32■□□□□ 0.2
Fen1P39749 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fen1P39749 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fen1P39749 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fen1P39749 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Fen1P39749 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fen1P39749 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fen1P39749 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.31■□□□□ 0.2
Fen1P39749 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fen1P39749 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fen1P39749 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fen1P39749 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.31■□□□□ 0.2
Fen1P39749 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.31■□□□□ 0.2
Fen1P39749 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fen1P39749 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fen1P39749 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fen1P39749 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fen1P39749 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Fen1P39749 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fen1P39749 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Fen1P39749 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.31■□□□□ 0.2
Fen1P39749 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.31■□□□□ 0.2
Fen1P39749 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fen1P39749 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Fen1P39749 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fen1P39749 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fen1P39749 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fen1P39749 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fen1P39749 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Fen1P39749 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fen1P39749 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fen1P39749 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fen1P39749 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Fen1P39749 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fen1P39749 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fen1P39749 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fen1P39749 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fen1P39749 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fen1P39749 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fen1P39749 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fen1P39749 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fen1P39749 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fen1P39749 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Fen1P39749 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fen1P39749 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Fen1P39749 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fen1P39749 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.3■□□□□ 0.2
Fen1P39749 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Fen1P39749 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Fen1P39749 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.29■□□□□ 0.2
Fen1P39749 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Fen1P39749 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Fen1P39749 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.29■□□□□ 0.2
Fen1P39749 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Fen1P39749 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.29■□□□□ 0.2
Fen1P39749 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.29■□□□□ 0.2
Fen1P39749 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.29■□□□□ 0.2
Fen1P39749 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.29■□□□□ 0.2
Fen1P39749 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.29■□□□□ 0.2
Fen1P39749 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.29■□□□□ 0.2
Fen1P39749 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Fen1P39749 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.29■□□□□ 0.2
Fen1P39749 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Fen1P39749 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.28■□□□□ 0.2
Fen1P39749 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Fen1P39749 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.28■□□□□ 0.2
Fen1P39749 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Fen1P39749 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Fen1P39749 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms