Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sftpa1P35242 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Sftpa1P35242 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sftpa1P35242 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.9□□□□□ -0.02
Sftpa1P35242 Gm27646-201ENSMUST00000183989 110 ntBASIC14.9□□□□□ -0.02
Sftpa1P35242 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.9□□□□□ -0.02
Sftpa1P35242 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.9□□□□□ -0.02
Sftpa1P35242 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.9□□□□□ -0.02
Sftpa1P35242 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sftpa1P35242 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Sftpa1P35242 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sftpa1P35242 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sftpa1P35242 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sftpa1P35242 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Sftpa1P35242 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Sftpa1P35242 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sftpa1P35242 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sftpa1P35242 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sftpa1P35242 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sftpa1P35242 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sftpa1P35242 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sftpa1P35242 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sftpa1P35242 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.89□□□□□ -0.03
Sftpa1P35242 Gm14701-201ENSMUST00000117156 348 ntBASIC14.89□□□□□ -0.03
Sftpa1P35242 Gm15920-201ENSMUST00000118998 402 ntBASIC14.89□□□□□ -0.03
Sftpa1P35242 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.89□□□□□ -0.03
Sftpa1P35242 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.89□□□□□ -0.03
Sftpa1P35242 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.89□□□□□ -0.03
Sftpa1P35242 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sftpa1P35242 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sftpa1P35242 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sftpa1P35242 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sftpa1P35242 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Sftpa1P35242 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.89□□□□□ -0.03
Sftpa1P35242 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sftpa1P35242 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sftpa1P35242 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sftpa1P35242 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sftpa1P35242 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sftpa1P35242 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sftpa1P35242 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sftpa1P35242 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.88□□□□□ -0.03
Sftpa1P35242 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Sftpa1P35242 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Sftpa1P35242 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sftpa1P35242 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sftpa1P35242 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sftpa1P35242 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sftpa1P35242 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sftpa1P35242 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sftpa1P35242 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.88□□□□□ -0.03
Sftpa1P35242 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sftpa1P35242 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.88□□□□□ -0.03
Sftpa1P35242 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.88□□□□□ -0.03
Sftpa1P35242 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sftpa1P35242 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.88□□□□□ -0.03
Sftpa1P35242 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sftpa1P35242 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sftpa1P35242 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sftpa1P35242 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.88□□□□□ -0.03
Sftpa1P35242 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.88□□□□□ -0.03
Sftpa1P35242 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sftpa1P35242 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sftpa1P35242 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sftpa1P35242 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sftpa1P35242 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sftpa1P35242 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Sftpa1P35242 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sftpa1P35242 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sftpa1P35242 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sftpa1P35242 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.87□□□□□ -0.03
Sftpa1P35242 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sftpa1P35242 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sftpa1P35242 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sftpa1P35242 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.87□□□□□ -0.03
Sftpa1P35242 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.87□□□□□ -0.03
Sftpa1P35242 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.87□□□□□ -0.03
Sftpa1P35242 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sftpa1P35242 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sftpa1P35242 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sftpa1P35242 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sftpa1P35242 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.87□□□□□ -0.03
Sftpa1P35242 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.87□□□□□ -0.03
Sftpa1P35242 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sftpa1P35242 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sftpa1P35242 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sftpa1P35242 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sftpa1P35242 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Sftpa1P35242 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.86□□□□□ -0.03
Sftpa1P35242 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.86□□□□□ -0.03
Sftpa1P35242 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sftpa1P35242 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.86□□□□□ -0.03
Sftpa1P35242 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.86□□□□□ -0.03
Sftpa1P35242 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Sftpa1P35242 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.86□□□□□ -0.03
Sftpa1P35242 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.86□□□□□ -0.03
Sftpa1P35242 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sftpa1P35242 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sftpa1P35242 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
Sftpa1P35242 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms