Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.54■□□□□ 0.56
Vcam1P29533 Gm9727-201ENSMUST00000161387 555 ntBASIC18.54■□□□□ 0.56
Vcam1P29533 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcam1P29533 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.54■□□□□ 0.56
Vcam1P29533 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.54■□□□□ 0.56
Vcam1P29533 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vcam1P29533 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcam1P29533 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.54■□□□□ 0.56
Vcam1P29533 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Vcam1P29533 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcam1P29533 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Vcam1P29533 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcam1P29533 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Vcam1P29533 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vcam1P29533 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcam1P29533 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Vcam1P29533 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vcam1P29533 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Vcam1P29533 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.53■□□□□ 0.56
Vcam1P29533 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.53■□□□□ 0.56
Vcam1P29533 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vcam1P29533 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Vcam1P29533 Gm14494-201ENSMUST00000118786 435 ntBASIC18.53■□□□□ 0.56
Vcam1P29533 Gm11764-201ENSMUST00000120221 623 ntBASIC18.53■□□□□ 0.56
Vcam1P29533 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vcam1P29533 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vcam1P29533 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vcam1P29533 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Vcam1P29533 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vcam1P29533 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Vcam1P29533 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vcam1P29533 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vcam1P29533 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vcam1P29533 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Vcam1P29533 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vcam1P29533 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Vcam1P29533 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vcam1P29533 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vcam1P29533 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vcam1P29533 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vcam1P29533 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Vcam1P29533 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vcam1P29533 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Vcam1P29533 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vcam1P29533 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.52■□□□□ 0.56
Vcam1P29533 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.52■□□□□ 0.56
Vcam1P29533 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vcam1P29533 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vcam1P29533 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.52■□□□□ 0.56
Vcam1P29533 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.52■□□□□ 0.56
Vcam1P29533 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vcam1P29533 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vcam1P29533 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Vcam1P29533 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.52■□□□□ 0.55
Vcam1P29533 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.52■□□□□ 0.55
Vcam1P29533 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcam1P29533 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.51■□□□□ 0.55
Vcam1P29533 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcam1P29533 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcam1P29533 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcam1P29533 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.51■□□□□ 0.55
Vcam1P29533 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcam1P29533 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcam1P29533 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcam1P29533 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcam1P29533 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Vcam1P29533 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcam1P29533 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Vcam1P29533 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcam1P29533 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcam1P29533 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcam1P29533 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcam1P29533 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcam1P29533 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcam1P29533 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcam1P29533 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcam1P29533 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Vcam1P29533 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vcam1P29533 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcam1P29533 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Vcam1P29533 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcam1P29533 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vcam1P29533 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Vcam1P29533 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.5■□□□□ 0.55
Vcam1P29533 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Vcam1P29533 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.5■□□□□ 0.55
Vcam1P29533 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.5■□□□□ 0.55
Vcam1P29533 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcam1P29533 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vcam1P29533 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcam1P29533 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcam1P29533 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcam1P29533 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vcam1P29533 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vcam1P29533 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Vcam1P29533 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vcam1P29533 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcam1P29533 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcam1P29533 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.49■□□□□ 0.55
Vcam1P29533 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms