Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.92□□□□□ -0.02
Cd40lgP27548 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Cd40lgP27548 Gm11950-201ENSMUST00000121615 838 ntBASIC14.92□□□□□ -0.02
Cd40lgP27548 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.92□□□□□ -0.02
Cd40lgP27548 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cd40lgP27548 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cd40lgP27548 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cd40lgP27548 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Cd40lgP27548 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Mir770-201ENSMUST00000103252 94 ntBASIC14.91□□□□□ -0.02
Cd40lgP27548 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.91□□□□□ -0.02
Cd40lgP27548 Gm29518-201ENSMUST00000190858 372 ntBASIC14.91□□□□□ -0.02
Cd40lgP27548 Gm17808-201ENSMUST00000200859 894 ntBASIC14.91□□□□□ -0.02
Cd40lgP27548 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cd40lgP27548 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cd40lgP27548 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cd40lgP27548 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cd40lgP27548 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cd40lgP27548 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40lgP27548 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40lgP27548 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cd40lgP27548 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Cd40lgP27548 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Cd40lgP27548 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40lgP27548 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40lgP27548 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Cd40lgP27548 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40lgP27548 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40lgP27548 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40lgP27548 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.9□□□□□ -0.02
Cd40lgP27548 Gm45328-201ENSMUST00000210942 917 ntBASIC14.9□□□□□ -0.02
Cd40lgP27548 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cd40lgP27548 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40lgP27548 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cd40lgP27548 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40lgP27548 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40lgP27548 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40lgP27548 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40lgP27548 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cd40lgP27548 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.9□□□□□ -0.02
Cd40lgP27548 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40lgP27548 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40lgP27548 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40lgP27548 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40lgP27548 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40lgP27548 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.89□□□□□ -0.03
Cd40lgP27548 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Cd40lgP27548 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40lgP27548 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.89□□□□□ -0.03
Cd40lgP27548 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40lgP27548 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40lgP27548 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40lgP27548 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40lgP27548 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40lgP27548 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40lgP27548 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40lgP27548 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.89□□□□□ -0.03
Cd40lgP27548 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cd40lgP27548 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cd40lgP27548 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40lgP27548 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40lgP27548 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40lgP27548 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.88□□□□□ -0.03
Cd40lgP27548 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cd40lgP27548 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40lgP27548 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cd40lgP27548 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms