Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Aldh1a1P24549 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Aldh1a1P24549 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Aldh1a1P24549 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Aldh1a1P24549 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Aldh1a1P24549 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Aldh1a1P24549 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Aldh1a1P24549 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Aldh1a1P24549 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Aldh1a1P24549 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Aldh1a1P24549 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Aldh1a1P24549 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Aldh1a1P24549 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Aldh1a1P24549 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Aldh1a1P24549 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Aldh1a1P24549 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Aldh1a1P24549 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.31■□□□□ 0.36
Aldh1a1P24549 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Aldh1a1P24549 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Aldh1a1P24549 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Aldh1a1P24549 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Aldh1a1P24549 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Aldh1a1P24549 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.3■□□□□ 0.36
Aldh1a1P24549 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Aldh1a1P24549 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.3■□□□□ 0.36
Aldh1a1P24549 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Aldh1a1P24549 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Aldh1a1P24549 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Aldh1a1P24549 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.3■□□□□ 0.36
Aldh1a1P24549 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Aldh1a1P24549 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.3■□□□□ 0.36
Aldh1a1P24549 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Aldh1a1P24549 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Aldh1a1P24549 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.3■□□□□ 0.36
Aldh1a1P24549 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.3■□□□□ 0.36
Aldh1a1P24549 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Aldh1a1P24549 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Aldh1a1P24549 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Aldh1a1P24549 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.29■□□□□ 0.36
Aldh1a1P24549 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Aldh1a1P24549 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.29■□□□□ 0.36
Aldh1a1P24549 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.29■□□□□ 0.36
Aldh1a1P24549 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.29■□□□□ 0.36
Aldh1a1P24549 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.29■□□□□ 0.36
Aldh1a1P24549 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.29■□□□□ 0.36
Aldh1a1P24549 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Aldh1a1P24549 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Aldh1a1P24549 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Aldh1a1P24549 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Aldh1a1P24549 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Aldh1a1P24549 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Aldh1a1P24549 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Aldh1a1P24549 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Aldh1a1P24549 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Aldh1a1P24549 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Aldh1a1P24549 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.27■□□□□ 0.36
Aldh1a1P24549 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Aldh1a1P24549 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.27■□□□□ 0.36
Aldh1a1P24549 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.27■□□□□ 0.36
Aldh1a1P24549 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Aldh1a1P24549 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.27■□□□□ 0.36
Aldh1a1P24549 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Aldh1a1P24549 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Aldh1a1P24549 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Aldh1a1P24549 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Aldh1a1P24549 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Aldh1a1P24549 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Aldh1a1P24549 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Aldh1a1P24549 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Aldh1a1P24549 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Aldh1a1P24549 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Aldh1a1P24549 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Aldh1a1P24549 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Aldh1a1P24549 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Aldh1a1P24549 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Aldh1a1P24549 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Aldh1a1P24549 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Aldh1a1P24549 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Aldh1a1P24549 Gm8344-201ENSMUST00000119813 856 ntBASIC17.26■□□□□ 0.35
Aldh1a1P24549 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Aldh1a1P24549 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.26■□□□□ 0.35
Aldh1a1P24549 Gm45167-201ENSMUST00000208007 322 ntBASIC17.26■□□□□ 0.35
Aldh1a1P24549 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Aldh1a1P24549 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms