Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.15■□□□□ 0.02
Sod1P08228 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sod1P08228 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sod1P08228 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sod1P08228 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Sod1P08228 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sod1P08228 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sod1P08228 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sod1P08228 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sod1P08228 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sod1P08228 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sod1P08228 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sod1P08228 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sod1P08228 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sod1P08228 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sod1P08228 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.14■□□□□ 0.01
Sod1P08228 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sod1P08228 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sod1P08228 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.14■□□□□ 0.01
Sod1P08228 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sod1P08228 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Sod1P08228 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.14■□□□□ 0.01
Sod1P08228 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.14■□□□□ 0.01
Sod1P08228 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.14■□□□□ 0.01
Sod1P08228 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.14■□□□□ 0.01
Sod1P08228 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sod1P08228 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Sod1P08228 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sod1P08228 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sod1P08228 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sod1P08228 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sod1P08228 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sod1P08228 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sod1P08228 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.14■□□□□ 0.01
Sod1P08228 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Sod1P08228 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sod1P08228 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.13■□□□□ 0.01
Sod1P08228 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sod1P08228 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.13■□□□□ 0.01
Sod1P08228 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.13■□□□□ 0.01
Sod1P08228 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sod1P08228 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sod1P08228 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sod1P08228 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sod1P08228 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sod1P08228 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Sod1P08228 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.13■□□□□ 0.01
Sod1P08228 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sod1P08228 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sod1P08228 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sod1P08228 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.13■□□□□ 0.01
Sod1P08228 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.13■□□□□ 0.01
Sod1P08228 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.13■□□□□ 0.01
Sod1P08228 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.13■□□□□ 0.01
Sod1P08228 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Sod1P08228 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.13■□□□□ 0.01
Sod1P08228 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sod1P08228 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sod1P08228 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
Sod1P08228 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Sod1P08228 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sod1P08228 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sod1P08228 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Sod1P08228 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sod1P08228 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sod1P08228 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.12■□□□□ 0.01
Sod1P08228 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sod1P08228 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sod1P08228 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Sod1P08228 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.12■□□□□ 0.01
Sod1P08228 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sod1P08228 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sod1P08228 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sod1P08228 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sod1P08228 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.12■□□□□ 0.01
Sod1P08228 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Sod1P08228 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sod1P08228 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sod1P08228 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sod1P08228 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sod1P08228 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sod1P08228 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sod1P08228 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sod1P08228 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sod1P08228 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sod1P08228 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sod1P08228 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sod1P08228 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Sod1P08228 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sod1P08228 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Sod1P08228 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sod1P08228 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sod1P08228 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sod1P08228 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.11■□□□□ 0.01
Sod1P08228 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.11■□□□□ 0.01
Sod1P08228 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.11■□□□□ 0.01
Sod1P08228 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sod1P08228 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sod1P08228 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sod1P08228 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms