Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.36■□□□□ 0.21
PdgfrbP05622 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PdgfrbP05622 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PdgfrbP05622 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PdgfrbP05622 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PdgfrbP05622 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.35■□□□□ 0.21
PdgfrbP05622 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.35■□□□□ 0.21
PdgfrbP05622 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PdgfrbP05622 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.34■□□□□ 0.21
PdgfrbP05622 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PdgfrbP05622 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
PdgfrbP05622 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PdgfrbP05622 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PdgfrbP05622 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PdgfrbP05622 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PdgfrbP05622 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PdgfrbP05622 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PdgfrbP05622 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PdgfrbP05622 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PdgfrbP05622 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PdgfrbP05622 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PdgfrbP05622 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PdgfrbP05622 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.33■□□□□ 0.2
PdgfrbP05622 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PdgfrbP05622 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PdgfrbP05622 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PdgfrbP05622 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PdgfrbP05622 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PdgfrbP05622 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.33■□□□□ 0.2
PdgfrbP05622 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PdgfrbP05622 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PdgfrbP05622 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PdgfrbP05622 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PdgfrbP05622 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PdgfrbP05622 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PdgfrbP05622 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
PdgfrbP05622 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PdgfrbP05622 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PdgfrbP05622 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PdgfrbP05622 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PdgfrbP05622 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PdgfrbP05622 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
PdgfrbP05622 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PdgfrbP05622 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PdgfrbP05622 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.32■□□□□ 0.2
PdgfrbP05622 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PdgfrbP05622 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PdgfrbP05622 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PdgfrbP05622 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PdgfrbP05622 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PdgfrbP05622 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
PdgfrbP05622 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
PdgfrbP05622 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PdgfrbP05622 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PdgfrbP05622 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.32■□□□□ 0.2
PdgfrbP05622 Gm44430-201ENSMUST00000203376 995 ntBASIC16.32■□□□□ 0.2
PdgfrbP05622 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PdgfrbP05622 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PdgfrbP05622 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms