Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PrnpP04925 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PrnpP04925 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PrnpP04925 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PrnpP04925 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PrnpP04925 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PrnpP04925 Gm4995-201ENSMUST00000117247 432 ntBASIC16.73■□□□□ 0.27
PrnpP04925 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.73■□□□□ 0.27
PrnpP04925 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.73■□□□□ 0.27
PrnpP04925 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.73■□□□□ 0.27
PrnpP04925 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PrnpP04925 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PrnpP04925 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PrnpP04925 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.73■□□□□ 0.27
PrnpP04925 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PrnpP04925 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PrnpP04925 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PrnpP04925 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PrnpP04925 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.72■□□□□ 0.27
PrnpP04925 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrnpP04925 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PrnpP04925 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrnpP04925 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PrnpP04925 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PrnpP04925 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
PrnpP04925 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrnpP04925 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
PrnpP04925 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PrnpP04925 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrnpP04925 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.72■□□□□ 0.27
PrnpP04925 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrnpP04925 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PrnpP04925 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrnpP04925 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrnpP04925 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrnpP04925 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PrnpP04925 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrnpP04925 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrnpP04925 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrnpP04925 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrnpP04925 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PrnpP04925 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PrnpP04925 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PrnpP04925 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PrnpP04925 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.71■□□□□ 0.27
PrnpP04925 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PrnpP04925 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.71■□□□□ 0.27
PrnpP04925 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PrnpP04925 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PrnpP04925 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PrnpP04925 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PrnpP04925 Mir8117-201ENSMUST00000184773 107 ntBASIC16.71■□□□□ 0.27
PrnpP04925 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PrnpP04925 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PrnpP04925 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PrnpP04925 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.71■□□□□ 0.27
PrnpP04925 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PrnpP04925 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PrnpP04925 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PrnpP04925 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PrnpP04925 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PrnpP04925 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.71■□□□□ 0.26
PrnpP04925 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PrnpP04925 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.7■□□□□ 0.26
PrnpP04925 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PrnpP04925 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PrnpP04925 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PrnpP04925 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PrnpP04925 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PrnpP04925 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.7■□□□□ 0.26
PrnpP04925 Gm5682-201ENSMUST00000173402 505 ntBASIC16.7■□□□□ 0.26
PrnpP04925 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PrnpP04925 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PrnpP04925 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PrnpP04925 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PrnpP04925 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PrnpP04925 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PrnpP04925 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PrnpP04925 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PrnpP04925 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PrnpP04925 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.69■□□□□ 0.26
PrnpP04925 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PrnpP04925 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PrnpP04925 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PrnpP04925 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PrnpP04925 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PrnpP04925 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PrnpP04925 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PrnpP04925 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PrnpP04925 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.69■□□□□ 0.26
PrnpP04925 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PrnpP04925 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PrnpP04925 Mir3113-201ENSMUST00000175478 76 ntBASIC16.69■□□□□ 0.26
PrnpP04925 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PrnpP04925 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PrnpP04925 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PrnpP04925 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.69■□□□□ 0.26
PrnpP04925 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PrnpP04925 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.69■□□□□ 0.26
PrnpP04925 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms