Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxa3P02831 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Hoxa3P02831 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hoxa3P02831 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Hoxa3P02831 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.54□□□□□ -0.24
Hoxa3P02831 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.54□□□□□ -0.24
Hoxa3P02831 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.54□□□□□ -0.24
Hoxa3P02831 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.54□□□□□ -0.24
Hoxa3P02831 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hoxa3P02831 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hoxa3P02831 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa3P02831 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxa3P02831 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Hoxa3P02831 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa3P02831 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa3P02831 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa3P02831 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hoxa3P02831 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa3P02831 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hoxa3P02831 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa3P02831 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa3P02831 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxa3P02831 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxa3P02831 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxa3P02831 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa3P02831 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa3P02831 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa3P02831 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa3P02831 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Hoxa3P02831 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa3P02831 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa3P02831 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa3P02831 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa3P02831 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa3P02831 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxa3P02831 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa3P02831 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Hoxa3P02831 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa3P02831 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa3P02831 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Hoxa3P02831 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa3P02831 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa3P02831 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa3P02831 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa3P02831 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa3P02831 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa3P02831 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa3P02831 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa3P02831 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa3P02831 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.52□□□□□ -0.25
Hoxa3P02831 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.52□□□□□ -0.25
Hoxa3P02831 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.52□□□□□ -0.25
Hoxa3P02831 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.52□□□□□ -0.25
Hoxa3P02831 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.52□□□□□ -0.25
Hoxa3P02831 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.52□□□□□ -0.25
Hoxa3P02831 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.52□□□□□ -0.25
Hoxa3P02831 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.52□□□□□ -0.25
Hoxa3P02831 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa3P02831 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms