Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ClppO88696 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.75■□□□□ 0.11
ClppO88696 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClppO88696 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClppO88696 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
ClppO88696 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClppO88696 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.75■□□□□ 0.11
ClppO88696 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.75■□□□□ 0.11
ClppO88696 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ClppO88696 Gm13216-201ENSMUST00000117145 591 ntBASIC15.75■□□□□ 0.11
ClppO88696 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.75■□□□□ 0.11
ClppO88696 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ClppO88696 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.75■□□□□ 0.11
ClppO88696 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClppO88696 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.75■□□□□ 0.11
ClppO88696 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.75■□□□□ 0.11
ClppO88696 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
ClppO88696 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
ClppO88696 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
ClppO88696 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.75■□□□□ 0.11
ClppO88696 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.75■□□□□ 0.11
ClppO88696 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClppO88696 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClppO88696 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClppO88696 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClppO88696 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClppO88696 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.75■□□□□ 0.11
ClppO88696 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
ClppO88696 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
ClppO88696 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ClppO88696 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.74■□□□□ 0.11
ClppO88696 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.74■□□□□ 0.11
ClppO88696 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.74■□□□□ 0.11
ClppO88696 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
ClppO88696 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.74■□□□□ 0.11
ClppO88696 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.74■□□□□ 0.11
ClppO88696 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ClppO88696 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClppO88696 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.73■□□□□ 0.11
ClppO88696 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ClppO88696 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ClppO88696 Gm24589-201ENSMUST00000116692 94 ntBASIC15.73■□□□□ 0.11
ClppO88696 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ClppO88696 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.73■□□□□ 0.11
ClppO88696 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
ClppO88696 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClppO88696 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClppO88696 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClppO88696 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClppO88696 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClppO88696 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClppO88696 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ClppO88696 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClppO88696 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClppO88696 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ClppO88696 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.72■□□□□ 0.11
ClppO88696 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.72■□□□□ 0.11
ClppO88696 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.72■□□□□ 0.11
ClppO88696 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClppO88696 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.72■□□□□ 0.11
ClppO88696 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ClppO88696 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ClppO88696 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClppO88696 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClppO88696 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClppO88696 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
ClppO88696 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms