Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cops6O88545 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Cops6O88545 Gm15467-201ENSMUST00000120582 445 ntBASIC19.7■□□□□ 0.74
Cops6O88545 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Cops6O88545 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.7■□□□□ 0.74
Cops6O88545 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cops6O88545 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Cops6O88545 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.7■□□□□ 0.74
Cops6O88545 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.7■□□□□ 0.74
Cops6O88545 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cops6O88545 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cops6O88545 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cops6O88545 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cops6O88545 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cops6O88545 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cops6O88545 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cops6O88545 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.7■□□□□ 0.74
Cops6O88545 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.7■□□□□ 0.74
Cops6O88545 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cops6O88545 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cops6O88545 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cops6O88545 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cops6O88545 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cops6O88545 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cops6O88545 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.69■□□□□ 0.74
Cops6O88545 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cops6O88545 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Cops6O88545 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.69■□□□□ 0.74
Cops6O88545 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.69■□□□□ 0.74
Cops6O88545 Gm27646-201ENSMUST00000183989 110 ntBASIC19.69■□□□□ 0.74
Cops6O88545 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.69■□□□□ 0.74
Cops6O88545 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cops6O88545 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cops6O88545 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Cops6O88545 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cops6O88545 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cops6O88545 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
Cops6O88545 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cops6O88545 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Cops6O88545 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cops6O88545 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cops6O88545 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Cops6O88545 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cops6O88545 Gm14140-201ENSMUST00000119999 995 ntBASIC19.68■□□□□ 0.74
Cops6O88545 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.68■□□□□ 0.74
Cops6O88545 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cops6O88545 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cops6O88545 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cops6O88545 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cops6O88545 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cops6O88545 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cops6O88545 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cops6O88545 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cops6O88545 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cops6O88545 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cops6O88545 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cops6O88545 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cops6O88545 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cops6O88545 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cops6O88545 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cops6O88545 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cops6O88545 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cops6O88545 Gm12260-201ENSMUST00000122447 411 ntBASIC19.67■□□□□ 0.74
Cops6O88545 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.67■□□□□ 0.74
Cops6O88545 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.67■□□□□ 0.74
Cops6O88545 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.67■□□□□ 0.74
Cops6O88545 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cops6O88545 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.67■□□□□ 0.74
Cops6O88545 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cops6O88545 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cops6O88545 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cops6O88545 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cops6O88545 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cops6O88545 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Cops6O88545 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Cops6O88545 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cops6O88545 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cops6O88545 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cops6O88545 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cops6O88545 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cops6O88545 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.66■□□□□ 0.74
Cops6O88545 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Cops6O88545 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cops6O88545 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cops6O88545 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cops6O88545 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cops6O88545 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cops6O88545 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cops6O88545 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.66■□□□□ 0.74
Cops6O88545 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.66■□□□□ 0.74
Cops6O88545 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.66■□□□□ 0.74
Cops6O88545 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cops6O88545 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.66■□□□□ 0.74
Cops6O88545 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cops6O88545 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cops6O88545 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.66■□□□□ 0.74
Cops6O88545 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cops6O88545 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cops6O88545 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cops6O88545 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms