Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf13O54965 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.69□□□□□ -0.06
Rnf13O54965 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Rnf13O54965 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.69□□□□□ -0.06
Rnf13O54965 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf13O54965 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.69□□□□□ -0.06
Rnf13O54965 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf13O54965 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf13O54965 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf13O54965 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf13O54965 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rnf13O54965 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rnf13O54965 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.68□□□□□ -0.06
Rnf13O54965 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.68□□□□□ -0.06
Rnf13O54965 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.68□□□□□ -0.06
Rnf13O54965 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.68□□□□□ -0.06
Rnf13O54965 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.68□□□□□ -0.06
Rnf13O54965 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.68□□□□□ -0.06
Rnf13O54965 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rnf13O54965 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.68□□□□□ -0.06
Rnf13O54965 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.68□□□□□ -0.06
Rnf13O54965 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rnf13O54965 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.68□□□□□ -0.06
Rnf13O54965 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.68□□□□□ -0.06
Rnf13O54965 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf13O54965 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Rnf13O54965 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rnf13O54965 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf13O54965 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.67□□□□□ -0.06
Rnf13O54965 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf13O54965 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf13O54965 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf13O54965 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf13O54965 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf13O54965 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf13O54965 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.67□□□□□ -0.06
Rnf13O54965 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Rnf13O54965 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf13O54965 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf13O54965 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf13O54965 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf13O54965 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Rnf13O54965 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.67□□□□□ -0.06
Rnf13O54965 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rnf13O54965 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf13O54965 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf13O54965 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf13O54965 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rnf13O54965 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf13O54965 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.67□□□□□ -0.06
Rnf13O54965 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf13O54965 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rnf13O54965 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rnf13O54965 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Gm13186-201ENSMUST00000118031 316 ntBASIC14.66□□□□□ -0.06
Rnf13O54965 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.66□□□□□ -0.06
Rnf13O54965 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.66□□□□□ -0.06
Rnf13O54965 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.66□□□□□ -0.06
Rnf13O54965 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.66□□□□□ -0.06
Rnf13O54965 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.66□□□□□ -0.06
Rnf13O54965 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rnf13O54965 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Rnf13O54965 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rnf13O54965 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf13O54965 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms