Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.35■□□□□ 0.21
ChkaO54804 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ChkaO54804 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ChkaO54804 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ChkaO54804 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
ChkaO54804 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.35■□□□□ 0.21
ChkaO54804 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.35■□□□□ 0.21
ChkaO54804 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.35■□□□□ 0.21
ChkaO54804 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ChkaO54804 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.35■□□□□ 0.21
ChkaO54804 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ChkaO54804 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.35■□□□□ 0.21
ChkaO54804 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ChkaO54804 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
ChkaO54804 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ChkaO54804 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.35■□□□□ 0.21
ChkaO54804 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.34■□□□□ 0.21
ChkaO54804 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ChkaO54804 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ChkaO54804 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ChkaO54804 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ChkaO54804 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.33■□□□□ 0.21
ChkaO54804 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ChkaO54804 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
ChkaO54804 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ChkaO54804 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ChkaO54804 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ChkaO54804 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ChkaO54804 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ChkaO54804 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ChkaO54804 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ChkaO54804 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ChkaO54804 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.33■□□□□ 0.2
ChkaO54804 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ChkaO54804 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ChkaO54804 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ChkaO54804 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ChkaO54804 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ChkaO54804 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ChkaO54804 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ChkaO54804 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ChkaO54804 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ChkaO54804 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ChkaO54804 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.32■□□□□ 0.2
ChkaO54804 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ChkaO54804 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ChkaO54804 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ChkaO54804 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms