Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1i3O35627 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Nr1i3O35627 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.39■□□□□ 0.37
Nr1i3O35627 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1i3O35627 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1i3O35627 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1i3O35627 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1i3O35627 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1i3O35627 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1i3O35627 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1i3O35627 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.38■□□□□ 0.37
Nr1i3O35627 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1i3O35627 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1i3O35627 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1i3O35627 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1i3O35627 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1i3O35627 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.38■□□□□ 0.37
Nr1i3O35627 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Nr1i3O35627 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Nr1i3O35627 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nr1i3O35627 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.38■□□□□ 0.37
Nr1i3O35627 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1i3O35627 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1i3O35627 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nr1i3O35627 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nr1i3O35627 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.38■□□□□ 0.37
Nr1i3O35627 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1i3O35627 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1i3O35627 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1i3O35627 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.38■□□□□ 0.37
Nr1i3O35627 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1i3O35627 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1i3O35627 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Nr1i3O35627 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nr1i3O35627 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nr1i3O35627 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1i3O35627 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1i3O35627 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1i3O35627 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1i3O35627 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1i3O35627 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1i3O35627 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1i3O35627 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.37■□□□□ 0.37
Nr1i3O35627 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.37■□□□□ 0.37
Nr1i3O35627 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.37■□□□□ 0.37
Nr1i3O35627 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.37■□□□□ 0.37
Nr1i3O35627 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1i3O35627 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1i3O35627 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.37■□□□□ 0.37
Nr1i3O35627 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1i3O35627 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1i3O35627 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Nr1i3O35627 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nr1i3O35627 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1i3O35627 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Nr1i3O35627 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1i3O35627 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1i3O35627 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1i3O35627 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1i3O35627 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1i3O35627 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1i3O35627 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1i3O35627 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.36■□□□□ 0.37
Nr1i3O35627 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1i3O35627 Gm11355-201ENSMUST00000121120 306 ntBASIC17.36■□□□□ 0.37
Nr1i3O35627 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.36■□□□□ 0.37
Nr1i3O35627 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1i3O35627 Gm44430-201ENSMUST00000203376 995 ntBASIC17.36■□□□□ 0.37
Nr1i3O35627 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Nr1i3O35627 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1i3O35627 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1i3O35627 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.35■□□□□ 0.37
Nr1i3O35627 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nr1i3O35627 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nr1i3O35627 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Prob1-201ENSMUST00000097619 3021 ntBASIC17.35■□□□□ 0.37
Nr1i3O35627 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nr1i3O35627 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nr1i3O35627 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Nr1i3O35627 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.35■□□□□ 0.37
Nr1i3O35627 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1i3O35627 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nr1i3O35627 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms