Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Gm12895-201ENSMUST00000122214 226 ntBASIC17.33■□□□□ 0.36
Usp35M0QWN7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Gm29707-201ENSMUST00000196325 491 ntBASIC17.33■□□□□ 0.36
Usp35M0QWN7 Gm44450-201ENSMUST00000199528 114 ntBASIC17.33■□□□□ 0.36
Usp35M0QWN7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.33■□□□□ 0.36
Usp35M0QWN7 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.33■□□□□ 0.36
Usp35M0QWN7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Usp35M0QWN7 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.32■□□□□ 0.36
Usp35M0QWN7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp35M0QWN7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Gm5867-201ENSMUST00000063197 592 ntBASIC17.31■□□□□ 0.36
Usp35M0QWN7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp35M0QWN7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp35M0QWN7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Usp35M0QWN7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp35M0QWN7 Gm27459-201ENSMUST00000184860 107 ntBASIC17.29■□□□□ 0.36
Usp35M0QWN7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms