Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sgo2bJ3QMK1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Sgo2bJ3QMK1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sgo2bJ3QMK1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Sgo2bJ3QMK1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Sgo2bJ3QMK1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sgo2bJ3QMK1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sgo2bJ3QMK1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Gm10013-201ENSMUST00000106074 672 ntBASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Sgo2bJ3QMK1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms