Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm17535J3KMR8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm17535J3KMR8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm17535J3KMR8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm17535J3KMR8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm17535J3KMR8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm17535J3KMR8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm17535J3KMR8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm17535J3KMR8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm17535J3KMR8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm17535J3KMR8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm17535J3KMR8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm17535J3KMR8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Gm13418-201ENSMUST00000119097 944 ntBASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Gm4535-201ENSMUST00000182274 558 ntBASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Gm8655-201ENSMUST00000221159 852 ntBASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Gm10355-201ENSMUST00000097146 517 ntBASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm17535J3KMR8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm17535J3KMR8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm17535J3KMR8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm17535J3KMR8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm17535J3KMR8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm17535J3KMR8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm17535J3KMR8 Gm11780-201ENSMUST00000136880 516 ntBASIC17.11■□□□□ 0.33
Gm17535J3KMR8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm17535J3KMR8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.11■□□□□ 0.33
Gm17535J3KMR8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.11■□□□□ 0.33
Gm17535J3KMR8 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.11■□□□□ 0.33
Gm17535J3KMR8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm17535J3KMR8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gm17535J3KMR8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm17535J3KMR8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm17535J3KMR8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms