Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh9F8VPK8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh9F8VPK8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh9F8VPK8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh9F8VPK8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh9F8VPK8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh9F8VPK8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh9F8VPK8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Gm18959-201ENSMUST00000208954 655 ntBASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh9F8VPK8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Gm26039-201ENSMUST00000158152 144 ntBASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Prob1-201ENSMUST00000097619 3021 ntBASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh9F8VPK8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Pcdh9F8VPK8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Mir5130-201ENSMUST00000175160 84 ntBASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Gm45058-201ENSMUST00000205810 766 ntBASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdh9F8VPK8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh9F8VPK8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms