Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
C530025M09RikF6RGA8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
C530025M09RikF6RGA8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.71
C530025M09RikF6RGA8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
C530025M09RikF6RGA8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
C530025M09RikF6RGA8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
C530025M09RikF6RGA8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
C530025M09RikF6RGA8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Gm12669-201ENSMUST00000122162 1009 ntBASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Gm27463-201ENSMUST00000183569 57 ntBASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Gm29257-201ENSMUST00000186115 639 ntBASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
C530025M09RikF6RGA8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Mir5122-201ENSMUST00000175004 89 ntBASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Gm3272-201ENSMUST00000181181 1229 ntBASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Gm10566-201ENSMUST00000086739 996 ntBASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
C530025M09RikF6RGA8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms