Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.44□□□□□ -0.1
Shank1D3YZU1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.44□□□□□ -0.1
Shank1D3YZU1 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.44□□□□□ -0.1
Shank1D3YZU1 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.44□□□□□ -0.1
Shank1D3YZU1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.44□□□□□ -0.1
Shank1D3YZU1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shank1D3YZU1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Shank1D3YZU1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shank1D3YZU1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.43□□□□□ -0.1
Shank1D3YZU1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shank1D3YZU1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shank1D3YZU1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.42□□□□□ -0.1
Shank1D3YZU1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shank1D3YZU1 Mir6956-201ENSMUST00000183598 62 ntBASIC14.41□□□□□ -0.1
Shank1D3YZU1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shank1D3YZU1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Gm27646-201ENSMUST00000183989 110 ntBASIC14.4□□□□□ -0.1
Shank1D3YZU1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms