Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm8825-201ENSMUST00000182565 998 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm4518-201ENSMUST00000182638 718 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clrn2B2RVW2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clrn2B2RVW2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Clrn2B2RVW2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clrn2B2RVW2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.67■□□□□ 0.58
Clrn2B2RVW2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.67■□□□□ 0.58
Clrn2B2RVW2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clrn2B2RVW2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Clrn2B2RVW2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Clrn2B2RVW2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clrn2B2RVW2 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.67■□□□□ 0.58
Clrn2B2RVW2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clrn2B2RVW2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Clrn2B2RVW2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clrn2B2RVW2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn2B2RVW2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Mir3113-201ENSMUST00000175478 76 ntBASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn2B2RVW2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.64■□□□□ 0.58
Clrn2B2RVW2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Clrn2B2RVW2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Clrn2B2RVW2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clrn2B2RVW2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clrn2B2RVW2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.64■□□□□ 0.57
Clrn2B2RVW2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.64■□□□□ 0.57
Clrn2B2RVW2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clrn2B2RVW2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.64■□□□□ 0.57
Clrn2B2RVW2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.64■□□□□ 0.57
Clrn2B2RVW2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Clrn2B2RVW2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Clrn2B2RVW2 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.64■□□□□ 0.57
Clrn2B2RVW2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.64■□□□□ 0.57
Clrn2B2RVW2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms