Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn1aA2APX8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Gm11780-201ENSMUST00000136880 516 ntBASIC16.88■□□□□ 0.29
Scn1aA2APX8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Scn1aA2APX8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn1aA2APX8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Gm10060-201ENSMUST00000212002 111 ntBASIC16.87■□□□□ 0.29
Scn1aA2APX8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Scn1aA2APX8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Scn1aA2APX8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gm8825-201ENSMUST00000182565 998 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gm4518-201ENSMUST00000182638 718 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.86■□□□□ 0.29
Scn1aA2APX8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms