Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
IsxA1A546 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IsxA1A546 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IsxA1A546 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.1■□□□□ 0.01
IsxA1A546 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IsxA1A546 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IsxA1A546 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
IsxA1A546 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IsxA1A546 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
IsxA1A546 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
IsxA1A546 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IsxA1A546 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IsxA1A546 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
IsxA1A546 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IsxA1A546 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.09■□□□□ 0.01
IsxA1A546 Flg-201ENSMUST00000050758 1488 ntBASIC15.09■□□□□ 0.01
IsxA1A546 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.09■□□□□ 0.01
IsxA1A546 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
IsxA1A546 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.09■□□□□ 0.01
IsxA1A546 Gm20049-201ENSMUST00000219950 730 ntBASIC15.09■□□□□ 0.01
IsxA1A546 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IsxA1A546 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
IsxA1A546 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
IsxA1A546 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
IsxA1A546 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
IsxA1A546 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
IsxA1A546 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IsxA1A546 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IsxA1A546 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
IsxA1A546 Gm12527-201ENSMUST00000117967 564 ntBASIC15.08■□□□□ 0
IsxA1A546 Gm22240-201ENSMUST00000175225 82 ntBASIC15.08■□□□□ 0
IsxA1A546 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IsxA1A546 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.08■□□□□ 0
IsxA1A546 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
IsxA1A546 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.08■□□□□ 0
IsxA1A546 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IsxA1A546 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
IsxA1A546 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.08■□□□□ 0
IsxA1A546 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
IsxA1A546 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IsxA1A546 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IsxA1A546 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
IsxA1A546 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.08■□□□□ 0
IsxA1A546 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.08■□□□□ 0
IsxA1A546 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.08■□□□□ 0
IsxA1A546 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.08■□□□□ 0
IsxA1A546 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.08■□□□□ 0
IsxA1A546 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
IsxA1A546 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.07■□□□□ 0
IsxA1A546 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
IsxA1A546 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.07■□□□□ 0
IsxA1A546 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 BC037039-201ENSMUST00000192003 2205 ntBASIC15.07■□□□□ 0
IsxA1A546 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
IsxA1A546 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.07■□□□□ 0
IsxA1A546 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.07■□□□□ 0
IsxA1A546 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.07■□□□□ 0
IsxA1A546 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.07■□□□□ 0
IsxA1A546 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
IsxA1A546 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.06■□□□□ 0
IsxA1A546 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IsxA1A546 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IsxA1A546 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms