Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.54■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.54■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.54■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.54■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm12497-201ENSMUST00000138778 237 ntBASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Mir8098-201ENSMUST00000184011 137 ntBASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Haglr-201ENSMUST00000100000 2085 ntBASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpl9-ps6A0A140T8T4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
Rpl9-ps6A0A140T8T4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm7506-201ENSMUST00000207758 815 ntBASIC16.52■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Rps4l-201ENSMUST00000071745 943 ntBASIC16.52■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpl9-ps6A0A140T8T4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpl9-ps6A0A140T8T4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rpl9-ps6A0A140T8T4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpl9-ps6A0A140T8T4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rpl9-ps6A0A140T8T4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpl9-ps6A0A140T8T4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpl9-ps6A0A140T8T4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.51■□□□□ 0.23
Rpl9-ps6A0A140T8T4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.51■□□□□ 0.23
Rpl9-ps6A0A140T8T4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.51■□□□□ 0.23
Rpl9-ps6A0A140T8T4 Gm5864-201ENSMUST00000202263 970 ntBASIC16.51■□□□□ 0.23
Rpl9-ps6A0A140T8T4 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.51■□□□□ 0.23
Rpl9-ps6A0A140T8T4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rpl9-ps6A0A140T8T4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpl9-ps6A0A140T8T4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpl9-ps6A0A140T8T4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpl9-ps6A0A140T8T4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rpl9-ps6A0A140T8T4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms