Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Gm12441-201ENSMUST00000121806 588 ntBASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav19A0A0B4J1K4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Gm37856-201ENSMUST00000191634 999 ntBASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Sybu-209ENSMUST00000228639 4113 ntBASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav19A0A0B4J1K4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav19A0A0B4J1K4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms