Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm15378-201ENSMUST00000121894 207 ntBASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms