Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Mir2861-201ENSMUST00000175539 82 ntBASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-3A0A075B648 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav12-3A0A075B648 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav12-3A0A075B648 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav12-3A0A075B648 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Gm43137-201ENSMUST00000198052 594 ntBASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-3A0A075B648 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Gm5812-201ENSMUST00000061073 957 ntBASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-3A0A075B648 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms