Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8n-2A0A075B633 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Trav8n-2A0A075B633 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8n-2A0A075B633 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav8n-2A0A075B633 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8n-2A0A075B633 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8n-2A0A075B633 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8n-2A0A075B633 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8n-2A0A075B633 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8n-2A0A075B633 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Trav8n-2A0A075B633 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trav8n-2A0A075B633 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 Mir3113-201ENSMUST00000175478 76 ntBASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 Mir8117-201ENSMUST00000184773 107 ntBASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 Rarb-207ENSMUST00000225921 2756 ntBASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8n-2A0A075B633 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Gm26308-201ENSMUST00000157768 69 ntBASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Gm18622-201ENSMUST00000219361 595 ntBASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8n-2A0A075B633 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm8825-201ENSMUST00000182565 998 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm4518-201ENSMUST00000182638 718 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8n-2A0A075B633 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms