Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Gm10052-201ENSMUST00000168019 960 ntBASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Gm7729-201ENSMUST00000050143 801 ntBASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav1A0A075B5Z4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav1A0A075B5Z4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav1A0A075B5Z4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.02□□□□□ -0.01
Trav1A0A075B5Z4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav1A0A075B5Z4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav1A0A075B5Z4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.02□□□□□ -0.01
Trav1A0A075B5Z4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav1A0A075B5Z4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav1A0A075B5Z4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Prob1-201ENSMUST00000097619 3021 ntBASIC15.01□□□□□ -0.01
Trav1A0A075B5Z4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav1A0A075B5Z4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms