Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 MIR5583-1-201ENST00000580941 59 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 MIR5194-201ENST00000582634 120 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC008752.3-201ENST00000588113 712 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 OR1M4P-201ENST00000589199 287 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AL355877.2-201ENST00000603670 358 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC245014.2-201ENST00000603689 287 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC246785.4-201ENST00000605374 287 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC097065.2-201ENST00000608159 533 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC004908.3-201ENST00000610248 625 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 RNA5SP432-201ENST00000362480 116 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-371P-201ENST00000364283 108 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-1303P-201ENST00000364841 107 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-384P-201ENST00000364900 104 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 RN7SKP226-201ENST00000364912 300 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 MIR764-201ENST00000390811 85 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-780P-201ENST00000391030 104 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 RNA5SP354-201ENST00000391247 136 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 SNORA40C-201ENST00000391285 128 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AL356057.2-201ENST00000403318 432 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 RNU2-8P-201ENST00000410727 190 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 MORF4L1P6-201ENST00000418771 268 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AC007560.1-201ENST00000426912 237 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 MTCO2P19-201ENST00000427513 598 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 SUMO1P4-201ENST00000429430 302 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AL591704.1-201ENST00000432574 275 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AL591806.2-201ENST00000433122 173 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 MTCO3P5-201ENST00000433620 714 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AC004383.1-201ENST00000438135 289 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AL136380.1-201ENST00000447970 162 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 HMGN2P10-201ENST00000448085 265 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 RPS15AP27-201ENST00000449183 343 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AC090255.1-201ENST00000495779 349 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AC108210.2-201ENST00000503681 201 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AC104806.1-201ENST00000508720 308 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 SNORD27.1-201ENST00000516319 72 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 ADI1P3-201ENST00000549509 470 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 DEFB122-202ENST00000569013 197 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AC087683.1-201ENST00000591187 441 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AC073539.2-201ENST00000597113 165 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AC005332.10-201ENST00000612725 619 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 Y_RNA.783-201ENST00000613546 102 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 FRG1KP-201ENST00000623592 341 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AC241585.2-209ENST00000638217 143 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AC002543.1-201ENST00000299783 1954 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AC010889.1-201ENST00000566193 2666 ntBASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
TRAV40A0A0B4J280 AC110491.1-201ENST00000562191 2010 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 OR4G2P-201ENST00000328113 903 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-179P-201ENST00000363350 107 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 Y_RNA.194-201ENST00000363985 102 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 RNA5SP37-201ENST00000365420 130 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 SET-203ENST00000372688 801 ntTSL 2 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-1029P-201ENST00000384109 107 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-750P-201ENST00000390946 107 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-550P-201ENST00000391057 101 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 RNA5SP111-201ENST00000411386 101 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AL139156.1-201ENST00000412785 841 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 MTND1P23-201ENST00000416931 372 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AC098614.2-201ENST00000426040 255 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AC010975.2-201ENST00000427781 588 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 Z96811.1-201ENST00000445880 108 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 IFNA11P-201ENST00000446352 526 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 snoU13.23-201ENST00000458863 104 ntBASIC1.67□□□□□ -2.14
TRAV40A0A0B4J280 RPL23AP42-201ENST00000471152 471 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms