Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AC010486.1-201ENST00000511793 424 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AC104136.1-201ENST00000512969 394 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 RNU2-69P-201ENST00000516061 100 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 RNA5SP320-201ENST00000516263 124 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 OR11H5P-201ENST00000554039 926 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 MTCO3P23-201ENST00000561363 289 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AC106782.4-201ENST00000568264 210 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 MIR1273C-201ENST00000578669 77 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 MIR548AC-201ENST00000585049 88 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AP000787.2-201ENST00000604432 568 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AL136221.1-201ENST00000621449 509 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.69□□□□□ -1.98
SIX2Q9NPC8 AC022336.2-201ENST00000568966 2538 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 RNU5E-4P-201ENST00000364931 120 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 Y_RNA.399-201ENST00000383955 105 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 RNU6-434P-201ENST00000384376 107 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 RNU6-140P-201ENST00000384566 108 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 MIR518C-201ENST00000384822 101 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 MIR578-201ENST00000384828 96 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 FAT1P1-201ENST00000406588 507 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 POLHP1-201ENST00000411806 470 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.69□□□□□ -1.98
SIX2Q9NPC8 BX682237.1-201ENST00000415016 335 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 AL513185.2-201ENST00000425543 193 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 ZNF863P-201ENST00000426746 417 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 TRIAP1P1-201ENST00000427062 225 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 AC098614.3-201ENST00000438957 440 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.69□□□□□ -1.98
SIX2Q9NPC8 AL360271.2-201ENST00000447710 161 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.69□□□□□ -1.98
SIX2Q9NPC8 PMCHL2-203ENST00000457791 237 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 DYNLL1P5-201ENST00000467158 270 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 AC022493.1-201ENST00000492984 337 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 AC114786.4-201ENST00000508771 728 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 RNA5SP356-201ENST00000515972 94 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 RNU6-826P-201ENST00000516827 104 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 Y_RNA.702-201ENST00000516843 96 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 RNU6-1314P-201ENST00000517139 104 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 RPL7P20-201ENST00000520308 745 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 AC022690.1-201ENST00000526681 550 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 MIR4319-201ENST00000577285 85 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 AC004805.2-201ENST00000605382 482 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 AC010297.1-201ENST00000623948 149 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.69□□□□□ -1.98
SIX2Q9NPC8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SIX2Q9NPC8 AC069528.2-201ENST00000624849 1991 ntBASIC2.69□□□□□ -1.98
SIX2Q9NPC8 AC121333.1-201ENST00000567488 2709 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 FTLP6-201ENST00000355274 422 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 Y_RNA.33-201ENST00000362591 102 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 Y_RNA.100-201ENST00000363141 102 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 RNU6-395P-201ENST00000365662 106 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 U8.9-201ENST00000365667 134 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 SNORA75B-201ENST00000384053 137 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 RNU6-45P-201ENST00000384471 107 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 MIR27B-201ENST00000385129 97 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 RPS4XP3-201ENST00000398541 413 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 RPL21P90-201ENST00000415692 466 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 AC009161.1-201ENST00000417306 376 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 COTL1P1-201ENST00000422309 375 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 SNRPEP9-201ENST00000436794 238 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 RPS12P2-201ENST00000439728 269 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.68□□□□□ -1.98
SIX2Q9NPC8 RNU7-167P-201ENST00000459160 62 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 HMGN1P12-201ENST00000499125 195 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 RNA5SP165-201ENST00000517142 115 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 AC009902.1-201ENST00000519351 183 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 AC090115.3-201ENST00000553218 849 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.68□□□□□ -1.98
SIX2Q9NPC8 LARP7P3-201ENST00000579888 337 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 AC011712.1-201ENST00000588959 234 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 BNIP3P25-201ENST00000596023 559 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 AC073539.2-201ENST00000597113 165 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 AC078899.3-201ENST00000599065 212 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.68□□□□□ -1.98
SIX2Q9NPC8 AC092747.3-201ENST00000603769 301 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 U2.17-201ENST00000611454 95 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 AC022306.2-201ENST00000617563 647 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 AC103705.1-201ENST00000619013 241 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 AC022418.1-201ENST00000624118 445 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 MTND4P35-201ENST00000604257 1375 ntBASIC2.68□□□□□ -1.98
SIX2Q9NPC8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.68□□□□□ -1.98
SIX2Q9NPC8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SIX2Q9NPC8 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SIX2Q9NPC8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SIX2Q9NPC8 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 MIR6073-201ENST00000352083 89 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 U8.8-201ENST00000365399 135 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms