Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RFC3P40938 Y_RNA.18-201ENST00000362461 102 ntBASIC1.72□□□□□ -2.13
RFC3P40938 SNORD114-19-201ENST00000363072 75 ntBASIC1.72□□□□□ -2.13
RFC3P40938 RNU6-482P-201ENST00000391068 107 ntBASIC1.72□□□□□ -2.13
RFC3P40938 SNORA26.9-201ENST00000391322 122 ntBASIC1.72□□□□□ -2.13
RFC3P40938 AL591034.2-201ENST00000402839 359 ntBASIC1.72□□□□□ -2.13
RFC3P40938 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.72□□□□□ -2.13
RFC3P40938 AC092809.3-201ENST00000415453 231 ntBASIC1.72□□□□□ -2.13
RFC3P40938 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.72□□□□□ -2.13
RFC3P40938 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.72□□□□□ -2.13
RFC3P40938 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.72□□□□□ -2.13
RFC3P40938 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.72□□□□□ -2.13
RFC3P40938 AL008629.1-201ENST00000438615 184 ntBASIC1.72□□□□□ -2.13
RFC3P40938 AC007677.1-201ENST00000445757 515 ntBASIC1.72□□□□□ -2.13
RFC3P40938 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.72□□□□□ -2.13
RFC3P40938 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.72□□□□□ -2.13
RFC3P40938 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.72□□□□□ -2.13
RFC3P40938 PMCHL2-203ENST00000457791 237 ntBASIC1.72□□□□□ -2.13
RFC3P40938 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.72□□□□□ -2.13
RFC3P40938 AC104564.1-201ENST00000493028 407 ntBASIC1.72□□□□□ -2.13
RFC3P40938 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RFC3P40938 RN7SKP219-201ENST00000516825 296 ntBASIC1.72□□□□□ -2.13
RFC3P40938 AC011979.2-201ENST00000527568 352 ntBASIC1.72□□□□□ -2.13
RFC3P40938 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.72□□□□□ -2.13
RFC3P40938 MIR4287-201ENST00000579398 78 ntBASIC1.72□□□□□ -2.13
RFC3P40938 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.72□□□□□ -2.13
RFC3P40938 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RFC3P40938 MTCO2P2-201ENST00000591258 225 ntBASIC1.72□□□□□ -2.13
RFC3P40938 AC121334.2-201ENST00000605387 271 ntBASIC1.72□□□□□ -2.13
RFC3P40938 AC005014.3-201ENST00000605985 190 ntBASIC1.72□□□□□ -2.13
RFC3P40938 AL627230.6-201ENST00000611129 280 ntBASIC1.72□□□□□ -2.13
RFC3P40938 AC092656.1-203ENST00000624134 423 ntBASIC1.72□□□□□ -2.13
RFC3P40938 ZNF702P-202ENST00000434269 1966 ntBASIC1.72□□□□□ -2.13
RFC3P40938 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
RFC3P40938 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RFC3P40938 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RFC3P40938 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
RFC3P40938 AC008555.8-201ENST00000623602 2168 ntBASIC1.71□□□□□ -2.14
RFC3P40938 RNU1-17P-201ENST00000363022 152 ntBASIC1.71□□□□□ -2.14
RFC3P40938 RNY4P16-201ENST00000364768 94 ntBASIC1.71□□□□□ -2.14
RFC3P40938 RNU6-234P-201ENST00000365229 104 ntBASIC1.71□□□□□ -2.14
RFC3P40938 SNORA75B-201ENST00000384053 137 ntBASIC1.71□□□□□ -2.14
RFC3P40938 RNU1-57P-201ENST00000384491 166 ntBASIC1.71□□□□□ -2.14
RFC3P40938 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RFC3P40938 RNA5SP489-201ENST00000410986 109 ntBASIC1.71□□□□□ -2.14
RFC3P40938 AC009518.2-201ENST00000418056 731 ntBASIC1.71□□□□□ -2.14
RFC3P40938 AC096920.1-201ENST00000423991 241 ntBASIC1.71□□□□□ -2.14
RFC3P40938 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.71□□□□□ -2.14
RFC3P40938 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.71□□□□□ -2.14
RFC3P40938 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.71□□□□□ -2.14
RFC3P40938 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.71□□□□□ -2.14
RFC3P40938 KATNBL1P6-201ENST00000453433 915 ntBASIC1.71□□□□□ -2.14
RFC3P40938 RPL23AP3-201ENST00000453844 468 ntBASIC1.71□□□□□ -2.14
RFC3P40938 MTND1P12-201ENST00000455231 147 ntBASIC1.71□□□□□ -2.14
RFC3P40938 HMGB1P35-201ENST00000503360 598 ntBASIC1.71□□□□□ -2.14
RFC3P40938 AC119751.4-201ENST00000507498 357 ntBASIC1.71□□□□□ -2.14
RFC3P40938 SNORA31.23-201ENST00000517219 133 ntBASIC1.71□□□□□ -2.14
RFC3P40938 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.71□□□□□ -2.14
RFC3P40938 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.71□□□□□ -2.14
RFC3P40938 AC022616.6-201ENST00000520479 119 ntBASIC1.71□□□□□ -2.14
RFC3P40938 NDUFA5P6-201ENST00000542110 379 ntBASIC1.71□□□□□ -2.14
RFC3P40938 AC092325.1-201ENST00000566449 554 ntBASIC1.71□□□□□ -2.14
RFC3P40938 MTND1P8-201ENST00000571424 950 ntBASIC1.71□□□□□ -2.14
RFC3P40938 AL022154.1-201ENST00000604698 785 ntBASIC1.71□□□□□ -2.14
RFC3P40938 AL031667.3-201ENST00000620124 655 ntBASIC1.71□□□□□ -2.14
RFC3P40938 AC009487.4-201ENST00000624969 3585 ntBASIC1.71□□□□□ -2.14
RFC3P40938 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RFC3P40938 AC092881.1-201ENST00000638218 2733 ntBASIC1.7□□□□□ -2.14
RFC3P40938 AL391994.1-201ENST00000254724 282 ntBASIC1.7□□□□□ -2.14
RFC3P40938 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.7□□□□□ -2.14
RFC3P40938 RNU6-1010P-201ENST00000362757 107 ntBASIC1.7□□□□□ -2.14
RFC3P40938 RNU1-23P-201ENST00000363361 144 ntBASIC1.7□□□□□ -2.14
RFC3P40938 U3.13-201ENST00000364804 214 ntBASIC1.7□□□□□ -2.14
RFC3P40938 RNU6-843P-201ENST00000384454 104 ntBASIC1.7□□□□□ -2.14
RFC3P40938 SNORA40.19-201ENST00000390846 128 ntBASIC1.7□□□□□ -2.14
RFC3P40938 RNA5SP450-201ENST00000411206 102 ntBASIC1.7□□□□□ -2.14
RFC3P40938 AC016831.2-201ENST00000417179 352 ntBASIC1.7□□□□□ -2.14
RFC3P40938 AL365338.1-201ENST00000422282 858 ntBASIC1.7□□□□□ -2.14
RFC3P40938 RPL31P63-201ENST00000422565 375 ntBASIC1.7□□□□□ -2.14
RFC3P40938 RPS27AP14-201ENST00000422868 454 ntBASIC1.7□□□□□ -2.14
RFC3P40938 AC008267.5-201ENST00000424928 265 ntBASIC1.7□□□□□ -2.14
RFC3P40938 HMGN2P19-201ENST00000425149 265 ntBASIC1.7□□□□□ -2.14
RFC3P40938 RPL37P21-201ENST00000435890 276 ntBASIC1.7□□□□□ -2.14
RFC3P40938 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.7□□□□□ -2.14
RFC3P40938 CR769776.1-201ENST00000441254 787 ntBASIC1.7□□□□□ -2.14
RFC3P40938 GDI2P2-201ENST00000445131 608 ntBASIC1.7□□□□□ -2.14
RFC3P40938 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.7□□□□□ -2.14
RFC3P40938 MED28P2-201ENST00000475771 317 ntBASIC1.7□□□□□ -2.14
RFC3P40938 AC007182.2-201ENST00000489251 402 ntBASIC1.7□□□□□ -2.14
RFC3P40938 MTND3P3-201ENST00000505004 126 ntBASIC1.7□□□□□ -2.14
RFC3P40938 AC116347.2-201ENST00000514912 523 ntBASIC1.7□□□□□ -2.14
RFC3P40938 Y_RNA.689-201ENST00000516589 107 ntBASIC1.7□□□□□ -2.14
RFC3P40938 AC109329.1-201ENST00000518744 317 ntBASIC1.7□□□□□ -2.14
RFC3P40938 AP003122.4-201ENST00000530980 758 ntBASIC1.7□□□□□ -2.14
RFC3P40938 AC090888.2-201ENST00000559765 1144 ntBASIC1.7□□□□□ -2.14
RFC3P40938 MIR3118-1-201ENST00000581787 76 ntBASIC1.7□□□□□ -2.14
RFC3P40938 RPL30P11-203ENST00000598995 310 ntBASIC1.7□□□□□ -2.14
RFC3P40938 AL031281.1-201ENST00000604049 488 ntBASIC1.7□□□□□ -2.14
RFC3P40938 AC092106.3-201ENST00000611308 722 ntBASIC1.7□□□□□ -2.14
RFC3P40938 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms