Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 RNU6-91P-201ENST00000607774 107 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 AL031667.3-201ENST00000620124 655 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 AC092104.1-201ENST00000497346 1441 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 AL391994.1-201ENST00000254724 282 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 RNA5SP432-201ENST00000362480 116 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 Y_RNA.97-201ENST00000363094 102 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 RNA5SP240-201ENST00000365355 128 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 SNORA4.3-201ENST00000365564 137 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2□□□□□ -2.09
KLHL28Q9NXS3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2□□□□□ -2.09
KLHL28Q9NXS3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2□□□□□ -2.09
KLHL28Q9NXS3 AC003071.1-201ENST00000451219 789 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2□□□□□ -2.09
KLHL28Q9NXS3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2□□□□□ -2.09
KLHL28Q9NXS3 AL139824.2-201ENST00000458731 1095 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 RPS3AP22-201ENST00000488297 769 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2□□□□□ -2.09
KLHL28Q9NXS3 FAM92A1P2-202ENST00000504766 877 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 AC109927.2-201ENST00000506416 303 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 RNU6-678P-201ENST00000516832 109 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 AC107934.1-201ENST00000522215 217 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2□□□□□ -2.09
KLHL28Q9NXS3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2□□□□□ -2.09
KLHL28Q9NXS3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2□□□□□ -2.09
KLHL28Q9NXS3 AC008749.1-201ENST00000597650 306 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 AL158827.2-201ENST00000602494 330 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 AC174048.1-201ENST00000603389 144 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 AL670379.10-201ENST00000604330 253 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 AL670379.9-201ENST00000605428 253 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 AC130324.3-201ENST00000614165 542 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 AL691447.3-201ENST00000635020 330 ntBASIC2□□□□□ -2.09
KLHL28Q9NXS3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2□□□□□ -2.09
KLHL28Q9NXS3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2□□□□□ -2.09
KLHL28Q9NXS3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 KPNA2P1-201ENST00000458289 1591 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 RNU6-1159P-201ENST00000362933 107 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 SNORA72.3-201ENST00000365074 132 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 RNU6-1200P-201ENST00000384162 107 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 RNU6-166P-201ENST00000384371 107 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 MIR95-201ENST00000385072 81 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 RNU6-1025P-201ENST00000410629 104 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 AC006366.1-201ENST00000422002 759 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 CYP2C59P-201ENST00000457790 269 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 AC093899.1-201ENST00000457984 376 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 RPL7P43-201ENST00000478876 753 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 RPL9P6-201ENST00000492764 598 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 MTND4P2-201ENST00000507767 1203 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 MRPS36P3-201ENST00000519284 130 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 AL157871.3-201ENST00000557231 293 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 AC026464.5-201ENST00000562497 722 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 MIR1273C-201ENST00000578669 77 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 AL627230.6-201ENST00000611129 280 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 AC006338.1-201ENST00000618453 749 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 ZNF702P-202ENST00000434269 1966 ntBASIC1.99□□□□□ -2.09
KLHL28Q9NXS3 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AC138393.1-203ENST00000327086 343 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 OR56A5-201ENST00000340110 738 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 SNORD113-6-201ENST00000363345 75 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 RNU6-960P-201ENST00000364056 120 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 RNY4P16-201ENST00000364768 94 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AL133475.1-201ENST00000404414 305 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AL512604.1-201ENST00000404812 257 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 RNU4-26P-201ENST00000410270 107 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AC127391.1-201ENST00000411737 98 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 HMGN2P38-201ENST00000423806 265 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AL161788.1-201ENST00000441805 169 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 GDI2P2-201ENST00000445131 608 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AL031659.1-201ENST00000447075 539 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AC025033.1-201ENST00000463883 194 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AC140059.1-201ENST00000489238 361 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AC116347.2-201ENST00000514912 523 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 RNU2-10P-201ENST00000516375 211 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 SCARNA16.3-201ENST00000516595 184 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 EEF1A1P37-201ENST00000522748 715 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 RANP3-201ENST00000530970 276 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.98□□□□□ -2.09
KLHL28Q9NXS3 SNRPGP18-201ENST00000553000 214 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms