Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
ZNF541Q9H0D2 RNU6-1287P-201ENST00000362914 107 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 SNORA51.4-201ENST00000364993 124 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 RNU6-1060P-201ENST00000384664 107 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 RNU2-66P-201ENST00000410650 161 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 MTND5P7-201ENST00000413558 1798 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 AL109913.1-201ENST00000421173 514 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 MTCO2P11-201ENST00000431069 680 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 AC244505.4-201ENST00000434905 287 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 SSXP5-201ENST00000443473 287 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 DPPA3P1-201ENST00000448050 469 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 AC103975.1-201ENST00000482506 483 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 AC132942.1-201ENST00000486753 483 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 ARL4AP2-201ENST00000507378 601 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 AC104806.1-201ENST00000508720 308 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 RNU6-914P-201ENST00000516749 109 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 FAM92A1P1-201ENST00000528023 890 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 AGGF1P4-201ENST00000568249 801 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 AC012507.3-201ENST00000603556 477 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 MIR15A-201ENST00000607334 83 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 OR5AK4P-201ENST00000635912 903 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ZNF541Q9H0D2 Y_RNA.22-201ENST00000362492 102 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 RNU1-105P-201ENST00000363470 161 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 RNU6-799P-201ENST00000363567 107 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 Y_RNA.164-201ENST00000363709 102 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 RNA5SP139-201ENST00000364340 117 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 RNU1-91P-201ENST00000364746 163 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 CISD1P1-201ENST00000393907 327 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 MIR888-201ENST00000401186 77 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 RNU7-182P-201ENST00000459009 62 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 RN7SKP219-201ENST00000516825 296 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC012557.2-201ENST00000605919 418 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC104237.2-201ENST00000612456 443 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 DUSP12P1-201ENST00000612874 516 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC012409.4-201ENST00000612923 249 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC073534.2-201ENST00000620377 381 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AL157786.1-207ENST00000627771 695 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 MTND5P17-201ENST00000418405 1603 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC069528.2-201ENST00000624849 1991 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 RNU6-1120P-201ENST00000362988 108 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 SNORA4.3-201ENST00000365564 137 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 RNU6-116P-201ENST00000384042 109 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 RNU6-658P-201ENST00000384606 106 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 RNU4-55P-201ENST00000410731 137 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 MTATP6P18-201ENST00000417994 673 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 ISCA1P1-201ENST00000426679 387 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC093151.1-201ENST00000427711 313 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 CALM2P2-201ENST00000428512 440 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AL589823.1-201ENST00000429577 183 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 FABP5P15-201ENST00000453566 214 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 MRPS17P3-201ENST00000465453 385 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 RPS29P20-201ENST00000489592 171 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 RPL23AP49-201ENST00000492925 468 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC139453.3-201ENST00000493276 369 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 RBBP4P6-201ENST00000508098 202 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC116337.1-201ENST00000509680 687 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 NACAP3-201ENST00000552100 481 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC016727.1-205ENST00000605437 569 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC136475.10-201ENST00000620253 385 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 AC024940.5-201ENST00000622889 474 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 CR381653.2-201ENST00000624041 768 ntBASIC2.93□□□□□ -1.94
ZNF541Q9H0D2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 MTND5P26-201ENST00000426018 1752 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms