Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-97P-201ENST00000363387 104 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 Y_RNA.214-201ENST00000364201 112 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 SNORA20.1-201ENST00000364790 130 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 MIR607-201ENST00000385241 96 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 RNA5SP219-201ENST00000390940 113 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 AC110754.1-201ENST00000399740 601 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 BX682237.1-201ENST00000415016 335 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 MTCO3P19-201ENST00000415864 321 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 PIGPP3-201ENST00000425307 415 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 AC011816.1-201ENST00000441346 546 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 AC073910.1-201ENST00000445047 438 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 RAC1P7-201ENST00000445367 377 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 Z75741.1-201ENST00000446793 314 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 CHEK2P4-201ENST00000450340 246 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 SNORD5.1-201ENST00000458800 75 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 SCARNA18-201ENST00000459004 134 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 snoU13.3-201ENST00000459441 104 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 AP001992.1-205ENST00000462248 379 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 DYNLL1P5-201ENST00000467158 270 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 RN7SL807P-201ENST00000470923 297 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 RPL31P13-201ENST00000484151 370 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 IGHV3-76-201ENST00000522465 295 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 MIR4276-201ENST00000584832 70 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 AC025588.3-201ENST00000604182 274 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 YPEL5P2-201ENST00000605553 359 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 ATP5A1P2-202ENST00000616464 443 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 U6.114-201ENST00000636407 96 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 AC116096.1-201ENST00000566804 2314 ntBASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.07□□□□□ -1.76
SH3RF3Q8TEJ3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 Y_RNA.152-201ENST00000363578 100 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-806P-201ENST00000365147 105 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 RNA5SP235-201ENST00000365411 114 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-746P-201ENST00000384112 109 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-550P-201ENST00000391057 101 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-1093P-201ENST00000391194 107 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 RNA5SP56-201ENST00000410277 118 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 ELOCP20-201ENST00000422460 345 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 AC108059.3-201ENST00000456388 214 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 AC104472.2-201ENST00000469035 601 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 RPS23P3-201ENST00000470993 430 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 AL136126.1-201ENST00000473603 402 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 AC114801.2-201ENST00000503825 781 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 AC022447.4-201ENST00000504053 364 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 Y_RNA.673-201ENST00000516306 88 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 RNU2-10P-201ENST00000516375 211 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-1069P-201ENST00000516612 133 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 MIR2114-201ENST00000516645 80 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 Y_RNA.715-201ENST00000517082 110 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-111P-201ENST00000517179 105 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 OR5D17P-201ENST00000531492 978 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 AC005476.1-201ENST00000554427 397 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 AC011494.1-201ENST00000596454 237 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 RPL23AP92-201ENST00000603609 255 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 Z98751.3-201ENST00000604447 521 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 AC096772.1-201ENST00000609146 564 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 TPTE2P4-201ENST00000258589 1605 ntBASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SH3RF3Q8TEJ3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-188P-201ENST00000364207 107 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 Y_RNA.276-201ENST00000364732 109 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms