Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC068057.2-201ENST00000624047 895 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.95□□□□□ -2.1
CDX2Q99626 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDX2Q99626 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.95□□□□□ -2.1
CDX2Q99626 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CDX2Q99626 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.94□□□□□ -2.1
CDX2Q99626 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
CDX2Q99626 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.94□□□□□ -2.1
CDX2Q99626 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CDX2Q99626 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CDX2Q99626 AL596028.1-201ENST00000326971 197 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 SNORD113-6-201ENST00000363345 75 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 SNORA38-201ENST00000363946 132 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 MIR320C1-201ENST00000408566 88 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 AL008987.1-201ENST00000415528 237 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 EIF1AXP1-201ENST00000419267 435 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.94□□□□□ -2.1
CDX2Q99626 AC010153.1-201ENST00000432862 727 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.94□□□□□ -2.1
CDX2Q99626 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.94□□□□□ -2.1
CDX2Q99626 CR769776.1-201ENST00000441254 787 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.94□□□□□ -2.1
CDX2Q99626 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.94□□□□□ -2.1
CDX2Q99626 MTCO2P6-201ENST00000463134 685 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 MTND4LP3-201ENST00000468320 276 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 RPS29P20-201ENST00000489592 171 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.94□□□□□ -2.1
CDX2Q99626 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.94□□□□□ -2.1
CDX2Q99626 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 RNU6-311P-201ENST00000516224 102 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 RN7SKP258-201ENST00000517151 304 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 RNA5SP291-201ENST00000517222 105 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.94□□□□□ -2.1
CDX2Q99626 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.94□□□□□ -2.1
CDX2Q99626 HMGN1P28-201ENST00000521340 364 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.94□□□□□ -2.1
CDX2Q99626 ZNF321P-202ENST00000550843 495 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.94□□□□□ -2.1
CDX2Q99626 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.94□□□□□ -2.1
CDX2Q99626 RPS3AP23-202ENST00000574601 686 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 MIR4255-201ENST00000579351 72 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 MIR544B-201ENST00000582372 78 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.94□□□□□ -2.1
CDX2Q99626 AC136443.5-201ENST00000603741 370 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.94□□□□□ -2.1
CDX2Q99626 AC021755.4-201ENST00000616620 456 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 AL137003.2-201ENST00000606924 2538 ntBASIC1.94□□□□□ -2.1
CDX2Q99626 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CDX2Q99626 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CDX2Q99626 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CDX2Q99626 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.93□□□□□ -2.1
CDX2Q99626 CCT4P2-201ENST00000233836 1548 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 AL391994.1-201ENST00000254724 282 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 RNU6-778P-201ENST00000363269 103 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 SNORA6-201ENST00000384033 151 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 U3.37-201ENST00000408528 213 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.93□□□□□ -2.1
CDX2Q99626 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.93□□□□□ -2.1
CDX2Q99626 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.93□□□□□ -2.1
CDX2Q99626 BPY2DP-201ENST00000422208 265 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 AC011233.1-201ENST00000422812 283 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.93□□□□□ -2.1
CDX2Q99626 ELOCP14-201ENST00000428070 331 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 AC244035.1-201ENST00000430042 390 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 USP12PX-201ENST00000432383 1057 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 MTND1P28-201ENST00000435623 950 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 ELOCP7-201ENST00000439968 331 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.93□□□□□ -2.1
CDX2Q99626 DPPA3P1-201ENST00000448050 469 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.93□□□□□ -2.1
CDX2Q99626 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.93□□□□□ -2.1
CDX2Q99626 AL160314.1-201ENST00000490836 438 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 RPS27AP10-201ENST00000496103 208 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.93□□□□□ -2.1
CDX2Q99626 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.93□□□□□ -2.1
CDX2Q99626 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.93□□□□□ -2.1
CDX2Q99626 MTATP6P15-201ENST00000527233 835 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.93□□□□□ -2.1
CDX2Q99626 AC068587.4-201ENST00000533893 186 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 AC016957.1-201ENST00000534895 309 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.93□□□□□ -2.1
CDX2Q99626 PRELID2P1-201ENST00000552837 301 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.93□□□□□ -2.1
CDX2Q99626 AC103987.3-201ENST00000582071 292 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 MIR3616-201ENST00000584070 92 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 AF038458.1-201ENST00000588406 262 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.93□□□□□ -2.1
CDX2Q99626 AC002545.1-201ENST00000592511 181 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 AL358072.1-201ENST00000604156 575 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 AC072039.2-201ENST00000608883 439 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 AC004908.2-201ENST00000609090 574 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 MIR6840-201ENST00000611937 71 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 AC008498.1-201ENST00000613012 531 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.93□□□□□ -2.1
CDX2Q99626 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDX2Q99626 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CDX2Q99626 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.92□□□□□ -2.1
CDX2Q99626 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms