Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC-0.28□□□□□ -2.45
RPL39P62891 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC-0.28□□□□□ -2.45
RPL39P62891 RMST_2.1-201ENST00000617263 136 ntBASIC-0.28□□□□□ -2.45
RPL39P62891 AC068722.2-201ENST00000618734 544 ntBASIC-0.28□□□□□ -2.45
RPL39P62891 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.29□□□□□ -2.46
RPL39P62891 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
RPL39P62891 RNA5SP432-201ENST00000362480 116 ntBASIC-0.29□□□□□ -2.46
RPL39P62891 SNORA32.1-201ENST00000364514 115 ntBASIC-0.29□□□□□ -2.46
RPL39P62891 U8.7-201ENST00000364940 136 ntBASIC-0.29□□□□□ -2.46
RPL39P62891 RNU4-12P-201ENST00000365233 139 ntBASIC-0.29□□□□□ -2.46
RPL39P62891 RNU6-1083P-201ENST00000384022 107 ntBASIC-0.29□□□□□ -2.46
RPL39P62891 AL449283.1-202ENST00000418249 604 ntBASIC-0.29□□□□□ -2.46
RPL39P62891 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC-0.29□□□□□ -2.46
RPL39P62891 HSPE1P9-201ENST00000440046 311 ntBASIC-0.29□□□□□ -2.46
RPL39P62891 MTND5P14-201ENST00000441481 1267 ntBASIC-0.29□□□□□ -2.46
RPL39P62891 MOB1AP2-201ENST00000446060 614 ntBASIC-0.29□□□□□ -2.46
RPL39P62891 RNU6ATAC13P-201ENST00000516152 131 ntBASIC-0.29□□□□□ -2.46
RPL39P62891 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC-0.29□□□□□ -2.46
RPL39P62891 AC022387.2-201ENST00000604050 448 ntBASIC-0.29□□□□□ -2.46
RPL39P62891 AC010738.1-201ENST00000604970 987 ntBASIC-0.29□□□□□ -2.46
RPL39P62891 AL356157.2-201ENST00000605122 111 ntBASIC-0.29□□□□□ -2.46
RPL39P62891 AP000254.1-201ENST00000609934 520 ntBASIC-0.29□□□□□ -2.46
RPL39P62891 RNU1-58P-201ENST00000362413 163 ntBASIC-0.3□□□□□ -2.46
RPL39P62891 RNY1P14-201ENST00000384426 108 ntBASIC-0.3□□□□□ -2.46
RPL39P62891 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.3□□□□□ -2.46
RPL39P62891 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC-0.3□□□□□ -2.46
RPL39P62891 AK3P2-201ENST00000507976 429 ntBASIC-0.3□□□□□ -2.46
RPL39P62891 AP003072.2-201ENST00000527756 676 ntBASIC-0.3□□□□□ -2.46
RPL39P62891 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.3□□□□□ -2.46
RPL39P62891 SNORA77B-201ENST00000578179 125 ntBASIC-0.3□□□□□ -2.46
RPL39P62891 AC092106.3-201ENST00000611308 722 ntBASIC-0.3□□□□□ -2.46
RPL39P62891 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.3□□□□□ -2.46
RPL39P62891 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.3□□□□□ -2.46
RPL39P62891 AL391994.1-201ENST00000254724 282 ntBASIC-0.31□□□□□ -2.46
RPL39P62891 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC-0.31□□□□□ -2.46
RPL39P62891 EIF1P1-201ENST00000421436 341 ntBASIC-0.31□□□□□ -2.46
RPL39P62891 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC-0.31□□□□□ -2.46
RPL39P62891 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.31□□□□□ -2.46
RPL39P62891 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.31□□□□□ -2.46
RPL39P62891 EIF1P4-201ENST00000572664 335 ntBASIC-0.31□□□□□ -2.46
RPL39P62891 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.31□□□□□ -2.46
RPL39P62891 Z98751.3-201ENST00000604447 521 ntBASIC-0.31□□□□□ -2.46
RPL39P62891 AL353765.1-201ENST00000605514 183 ntBASIC-0.31□□□□□ -2.46
RPL39P62891 AC073349.3-201ENST00000617616 186 ntBASIC-0.31□□□□□ -2.46
RPL39P62891 MIR6515-201ENST00000619843 57 ntBASIC-0.31□□□□□ -2.46
RPL39P62891 RNU1-23P-201ENST00000363361 144 ntBASIC-0.32□□□□□ -2.46
RPL39P62891 RNU6-1105P-201ENST00000384774 107 ntBASIC-0.32□□□□□ -2.46
RPL39P62891 RNU2-7P-201ENST00000410794 178 ntBASIC-0.32□□□□□ -2.46
RPL39P62891 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC-0.32□□□□□ -2.46
RPL39P62891 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.32□□□□□ -2.46
RPL39P62891 AC013267.1-201ENST00000458227 267 ntBASIC-0.32□□□□□ -2.46
RPL39P62891 AC092757.1-201ENST00000467293 467 ntBASIC-0.32□□□□□ -2.46
RPL39P62891 SNORA4.4-201ENST00000515921 135 ntBASIC-0.32□□□□□ -2.46
RPL39P62891 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC-0.32□□□□□ -2.46
RPL39P62891 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC-0.32□□□□□ -2.46
RPL39P62891 MIR3678-201ENST00000578455 94 ntBASIC-0.32□□□□□ -2.46
RPL39P62891 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC-0.32□□□□□ -2.46
RPL39P62891 RNU6-270P-201ENST00000364131 105 ntBASIC-0.33□□□□□ -2.46
RPL39P62891 RNU6-514P-201ENST00000384208 107 ntBASIC-0.33□□□□□ -2.46
RPL39P62891 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
RPL39P62891 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
RPL39P62891 AL355615.1-201ENST00000406187 641 ntBASIC-0.33□□□□□ -2.46
RPL39P62891 RPS15AP38-201ENST00000413110 372 ntBASIC-0.33□□□□□ -2.46
RPL39P62891 RPL22P18-201ENST00000417197 377 ntBASIC-0.33□□□□□ -2.46
RPL39P62891 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.33□□□□□ -2.46
RPL39P62891 HMGB1P29-201ENST00000505659 499 ntBASIC-0.33□□□□□ -2.46
RPL39P62891 AC022616.8-201ENST00000533569 253 ntBASIC-0.33□□□□□ -2.46
RPL39P62891 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC-0.33□□□□□ -2.46
RPL39P62891 AL136520.1-202ENST00000555494 763 ntBASIC-0.33□□□□□ -2.46
RPL39P62891 MIR3937-201ENST00000580135 106 ntBASIC-0.33□□□□□ -2.46
RPL39P62891 MIR4290-201ENST00000583807 95 ntBASIC-0.33□□□□□ -2.46
RPL39P62891 AC091805.2-201ENST00000603848 235 ntBASIC-0.33□□□□□ -2.46
RPL39P62891 AC068057.2-201ENST00000624047 895 ntBASIC-0.33□□□□□ -2.46
RPL39P62891 NR1H5P-201ENST00000452683 1377 ntBASIC-0.33□□□□□ -2.46
RPL39P62891 AC023934.1-201ENST00000574529 2389 ntBASIC-0.34□□□□□ -2.46
RPL39P62891 CALM2P3-201ENST00000400429 449 ntBASIC-0.34□□□□□ -2.46
RPL39P62891 AC099548.1-201ENST00000421443 426 ntBASIC-0.34□□□□□ -2.46
RPL39P62891 AC245047.7-201ENST00000440265 293 ntBASIC-0.34□□□□□ -2.46
RPL39P62891 RNU6-420P-201ENST00000458780 107 ntBASIC-0.34□□□□□ -2.46
RPL39P62891 AC084024.2-201ENST00000503480 791 ntBASIC-0.34□□□□□ -2.46
RPL39P62891 RNA5SP227-201ENST00000516184 113 ntBASIC-0.34□□□□□ -2.46
RPL39P62891 AP003392.2-201ENST00000527269 208 ntBASIC-0.34□□□□□ -2.46
RPL39P62891 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC-0.34□□□□□ -2.46
RPL39P62891 AC105245.1-201ENST00000581934 244 ntBASIC-0.34□□□□□ -2.46
RPL39P62891 SNORA4-201ENST00000584302 138 ntBASIC-0.34□□□□□ -2.46
RPL39P62891 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.34□□□□□ -2.46
RPL39P62891 AC091925.1-201ENST00000623204 462 ntBASIC-0.34□□□□□ -2.46
RPL39P62891 AC009033.1-201ENST00000624279 431 ntBASIC-0.34□□□□□ -2.46
RPL39P62891 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
RPL39P62891 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
RPL39P62891 AC073544.1-201ENST00000600110 1595 ntBASIC-0.35□□□□□ -2.47
RPL39P62891 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.47
RPL39P62891 RNA5SP63-201ENST00000391225 112 ntBASIC-0.35□□□□□ -2.47
RPL39P62891 RNA5SP496-201ENST00000391240 109 ntBASIC-0.35□□□□□ -2.47
RPL39P62891 U6atac.2-201ENST00000408644 118 ntBASIC-0.35□□□□□ -2.47
RPL39P62891 RPS24P7-201ENST00000416921 246 ntBASIC-0.35□□□□□ -2.47
RPL39P62891 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.35□□□□□ -2.47
RPL39P62891 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.35□□□□□ -2.47
RPL39P62891 MTCO2P20-201ENST00000437339 673 ntBASIC-0.35□□□□□ -2.47
RPL39P62891 TPMTP4-201ENST00000450749 678 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms