Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MTATP6P23-201ENST00000440153 476 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 RPL23AP58-201ENST00000440453 469 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 AL161651.1-201ENST00000440882 223 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 VN1R34P-201ENST00000447387 883 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 AL358232.1-201ENST00000448030 501 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 AC114781.4-201ENST00000513707 639 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 SCARNA14-201ENST00000516903 136 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 AC069113.1-201ENST00000517763 267 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 AC009248.2-201ENST00000619826 254 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 AP003122.5-201ENST00000527668 3766 ntBASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
ATPAF1Q5TC12 AC008669.1-201ENST00000565823 2178 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 Y_RNA.72-201ENST00000362894 103 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 Y_RNA.279-201ENST00000364763 95 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 Y_RNA.414-201ENST00000384011 101 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 MIR30B-201ENST00000384850 88 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 RNU6-750P-201ENST00000390946 107 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 AL356967.1-201ENST00000406305 431 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 MIR1289-1-201ENST00000408836 144 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 NDUFB4P5-201ENST00000415445 361 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 RPL7P10-201ENST00000417407 739 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 AL591419.1-201ENST00000427423 339 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 AL353572.1-201ENST00000442490 417 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 HIGD1AP2-201ENST00000446367 280 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 NIPA2P5-201ENST00000452282 464 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 PMCHL2-203ENST00000457791 237 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 AC093663.1-201ENST00000497190 394 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 RAC1P2-201ENST00000511164 579 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 RNU4-49P-201ENST00000516080 140 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 NDUFB9P3-201ENST00000521269 501 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 AC134698.4-201ENST00000523451 826 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 MIR5685-201ENST00000579080 79 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 MIR5187-201ENST00000583479 76 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 AC008121.1-201ENST00000603244 268 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 SNORA62.6-201ENST00000606322 83 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 AC107294.3-201ENST00000609211 526 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 FAM157A-202ENST00000615155 405 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 RMST_7.1-201ENST00000621935 268 ntBASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
ATPAF1Q5TC12 AC010889.1-201ENST00000566193 2666 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 CBX3P1-201ENST00000325243 554 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 SNORA72.1-201ENST00000363485 129 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 SNORD113-7-201ENST00000363762 77 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 FTH1P15-201ENST00000406984 280 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 AL096701.2-201ENST00000416920 238 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 AL353678.1-201ENST00000422735 741 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 RPL35AP12-201ENST00000425362 338 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 AC093151.1-201ENST00000427711 313 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 RPL7P12-201ENST00000446719 750 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 MTND4P18-201ENST00000447010 465 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 RNU7-138P-201ENST00000459479 64 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 RPL23AP45-201ENST00000476406 468 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 RPL7P43-201ENST00000478876 753 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 AC113155.1-201ENST00000511141 769 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 RN7SKP256-201ENST00000517201 314 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 AC025423.5-201ENST00000550230 219 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 AL121579.1-201ENST00000555129 305 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 MIR3942-201ENST00000585264 109 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 AC008739.2-201ENST00000597006 317 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 AL355877.2-201ENST00000603670 358 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 SCARNA4-202ENST00000625402 129 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 AC099654.7-201ENST00000635788 2127 ntBASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.16□□□□□ -1.9
ATPAF1Q5TC12 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms