Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SGO1Q5FBB7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
SGO1Q5FBB7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SGO1Q5FBB7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SGO1Q5FBB7 MIR412-201ENST00000362142 91 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 Y_RNA.157-201ENST00000363638 102 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 RNU6-1283P-201ENST00000365314 105 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 CD24P4-201ENST00000382840 243 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 RNU6-1179P-201ENST00000384667 107 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 MIR578-201ENST00000384828 96 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 FGF7P8-201ENST00000402994 292 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 NDUFS5P4-201ENST00000412983 318 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 RPL26P27-201ENST00000414397 437 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.01□□□□□ -1.93
SGO1Q5FBB7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.01□□□□□ -1.93
SGO1Q5FBB7 AC092017.2-201ENST00000427600 362 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 AL669831.1-202ENST00000428504 417 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 GTF2IP13-201ENST00000438487 386 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 AC009969.1-201ENST00000438726 172 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 RPL37P4-201ENST00000448908 268 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 MTATP6P7-201ENST00000453315 681 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 AC069439.1-201ENST00000494739 167 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.01□□□□□ -1.93
SGO1Q5FBB7 AC009901.1-201ENST00000506703 541 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.01□□□□□ -1.93
SGO1Q5FBB7 RNU6-703P-201ENST00000516946 107 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 NACAP3-201ENST00000552100 481 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 AC078814.3-201ENST00000553036 491 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.01□□□□□ -1.93
SGO1Q5FBB7 RNU6-89P-201ENST00000606519 100 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.01□□□□□ -1.93
SGO1Q5FBB7 AC090617.7-201ENST00000623952 126 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 AC022418.1-201ENST00000624118 445 ntBASIC3.01□□□□□ -1.93
SGO1Q5FBB7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SGO1Q5FBB7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.01□□□□□ -1.93
SGO1Q5FBB7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.01□□□□□ -1.93
SGO1Q5FBB7 AC233263.6-201ENST00000631132 1963 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3□□□□□ -1.93
SGO1Q5FBB7 RNU4-20P-201ENST00000365601 151 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 RNU1-73P-201ENST00000383971 164 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 RNU6-1027P-201ENST00000383998 107 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 Y_RNA.480-201ENST00000384364 102 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 MIR183-201ENST00000384958 110 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 RNU6-332P-201ENST00000391193 108 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 RNU4-26P-201ENST00000410270 107 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3□□□□□ -1.93
SGO1Q5FBB7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3□□□□□ -1.93
SGO1Q5FBB7 AC098614.2-201ENST00000426040 255 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 AC005300.1-201ENST00000428401 373 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 HMGB1P9-201ENST00000429856 646 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 AL121601.2-201ENST00000438019 707 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3□□□□□ -1.93
SGO1Q5FBB7 PRPS1P1-201ENST00000445305 876 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 AC010099.1-201ENST00000455434 375 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 RN7SL863P-201ENST00000462370 296 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3□□□□□ -1.93
SGO1Q5FBB7 AC022493.1-201ENST00000492984 337 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 AC002456.2-201ENST00000509356 380 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3□□□□□ -1.93
SGO1Q5FBB7 AC108043.1-201ENST00000512696 574 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 AC112206.3-201ENST00000514578 389 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 RNU2-69P-201ENST00000516061 100 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 RNU1-103P-201ENST00000516502 125 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 SNORA31.26-201ENST00000517250 137 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 AC009902.1-201ENST00000519351 183 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3□□□□□ -1.93
SGO1Q5FBB7 CENPUP1-201ENST00000526649 1202 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3□□□□□ -1.93
SGO1Q5FBB7 MTCO3P23-201ENST00000561363 289 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3□□□□□ -1.93
SGO1Q5FBB7 AC012119.1-201ENST00000603184 222 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 AC245389.1-201ENST00000605141 529 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 AP003400.5-201ENST00000624827 617 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3□□□□□ -1.93
SGO1Q5FBB7 U2.21-201ENST00000637295 81 ntBASIC3□□□□□ -1.93
SGO1Q5FBB7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SGO1Q5FBB7 AP003122.5-201ENST00000527668 3766 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SGO1Q5FBB7 RNU6-778P-201ENST00000363269 103 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 SNORA46-201ENST00000384762 135 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 MIR449B-201ENST00000384995 97 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 SNORD67-201ENST00000390833 111 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 SNORA16.2-201ENST00000390991 127 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 SNORA40C-201ENST00000391285 128 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 RPL5P18-201ENST00000406671 891 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 NDUFB4P5-201ENST00000415445 361 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 AL353621.1-201ENST00000418219 243 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 MYL8P-204ENST00000431574 518 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 HMGB1P31-201ENST00000437242 427 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 RPS12P18-201ENST00000442381 270 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 Z75741.1-201ENST00000446793 314 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 AL360271.2-201ENST00000447710 161 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 NDUFB1P2-201ENST00000449477 176 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 UQCRHP3-201ENST00000451503 251 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 PRSS3P4-201ENST00000453323 162 ntBASIC2.99□□□□□ -1.93
SGO1Q5FBB7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms