Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MTND4P14-201ENST00000435799 1354 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 AL139276.1-201ENST00000311910 1001 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 RNU6-1287P-201ENST00000362914 107 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 RNU6-483P-201ENST00000384088 108 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 RNU6-14P-201ENST00000384630 106 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 RNU6-1060P-201ENST00000384664 107 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 SNORA1.3-201ENST00000384676 136 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 RNU6-780P-201ENST00000391030 104 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 RPS12P24-201ENST00000412619 387 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 AC114491.1-201ENST00000416095 246 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 AC104332.2-201ENST00000429959 156 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 AL591704.1-201ENST00000432574 275 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 RPL21P2-201ENST00000440049 481 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 RNU6-420P-201ENST00000458780 107 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 AC117440.1-201ENST00000474107 571 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 AC098591.2-201ENST00000510152 315 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 RNU6-711P-201ENST00000517255 106 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 AK6P1-201ENST00000540219 478 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 MIR4703-201ENST00000577728 79 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 MIR4801-201ENST00000582704 82 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 BNIP3P9-201ENST00000603714 553 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 AC006020.1-201ENST00000420179 1854 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 AL049641.1-201ENST00000441055 1948 ntBASIC3.36□□□□□ -1.87
HDAC6Q9UBN7 Y_RNA.245-201ENST00000364493 95 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 Y_RNA.248-201ENST00000364501 109 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 RNU6-877P-201ENST00000383868 107 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 SNORA69-201ENST00000383895 132 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 RNU6-1029P-201ENST00000384109 107 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 MIR301A-201ENST00000385261 86 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 AC068050.1-201ENST00000394891 380 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 MRPS10P2-201ENST00000431226 381 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 RPS29P15-201ENST00000458329 171 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 RPS15AP34-201ENST00000487776 387 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 AC104806.1-201ENST00000508720 308 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 Y_RNA.704-201ENST00000516851 102 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 SNORD60.2-201ENST00000516883 86 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 HMGB1P14-201ENST00000557424 591 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 AC008752.3-201ENST00000588113 712 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 AL138889.2-201ENST00000603883 242 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 AC009570.1-201ENST00000609599 745 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 DISC2.1-201ENST00000612827 205 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 AC068831.7-201ENST00000616954 363 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 AC011155.2-201ENST00000623202 216 ntBASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HDAC6Q9UBN7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 UBE2L2-201ENST00000254302 429 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 Y_RNA.576-201ENST00000384781 102 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 OR6C66P-201ENST00000414917 930 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 AC093151.1-201ENST00000427711 313 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 AC007919.1-201ENST00000429380 217 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 AL512844.2-201ENST00000433990 593 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 AC244505.4-201ENST00000434905 287 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 SSXP5-201ENST00000443473 287 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 MTCO3P38-201ENST00000468910 766 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 RPL31P58-201ENST00000469001 379 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 RPL23AP11-201ENST00000475260 469 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 RN7SKP132-201ENST00000516001 208 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 RNA5SP367-201ENST00000516557 118 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 Y_RNA.689-201ENST00000516589 107 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 RNU6-835P-201ENST00000516974 104 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 RNA5SP290-201ENST00000517133 127 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 AC068135.2-201ENST00000569293 1028 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 AC098826.3-201ENST00000603823 466 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 AL161798.1-201ENST00000604630 131 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 AC022893.3-201ENST00000607665 437 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 AC007014.2-201ENST00000615581 479 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 AC002076.2-201ENST00000617362 122 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 MIR6076-201ENST00000617521 113 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 YWHAEP7-203ENST00000622054 312 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms