Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
PdfS4R2K0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PdfS4R2K0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Sybu-209ENSMUST00000228639 4113 ntBASIC12.45□□□□□ -0.42
PdfS4R2K0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.45□□□□□ -0.42
PdfS4R2K0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
PdfS4R2K0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
PdfS4R2K0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Mir2861-201ENSMUST00000175539 82 ntBASIC12.45□□□□□ -0.42
PdfS4R2K0 Mir6349-201ENSMUST00000184059 97 ntBASIC12.45□□□□□ -0.42
PdfS4R2K0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.45□□□□□ -0.42
PdfS4R2K0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.45□□□□□ -0.42
PdfS4R2K0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
PdfS4R2K0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
PdfS4R2K0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.45□□□□□ -0.42
PdfS4R2K0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdfS4R2K0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
PdfS4R2K0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
PdfS4R2K0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.44□□□□□ -0.42
PdfS4R2K0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.44□□□□□ -0.42
PdfS4R2K0 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.44□□□□□ -0.42
PdfS4R2K0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.44□□□□□ -0.42
PdfS4R2K0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
PdfS4R2K0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdfS4R2K0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdfS4R2K0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdfS4R2K0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdfS4R2K0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
PdfS4R2K0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdfS4R2K0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdfS4R2K0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdfS4R2K0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.43□□□□□ -0.42
PdfS4R2K0 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.43□□□□□ -0.42
PdfS4R2K0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.43□□□□□ -0.42
PdfS4R2K0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.43□□□□□ -0.42
PdfS4R2K0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.43□□□□□ -0.42
PdfS4R2K0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdfS4R2K0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdfS4R2K0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdfS4R2K0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdfS4R2K0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdfS4R2K0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PdfS4R2K0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdfS4R2K0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
PdfS4R2K0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdfS4R2K0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdfS4R2K0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.43□□□□□ -0.42
PdfS4R2K0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
PdfS4R2K0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdfS4R2K0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdfS4R2K0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms