Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.24■□□□□ 0.19
H2afb2S4R1M3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Mir770-201ENSMUST00000103252 94 ntBASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb2S4R1M3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Mir7071-201ENSMUST00000184847 69 ntBASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.22■□□□□ 0.19
H2afb2S4R1M3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb2S4R1M3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb2S4R1M3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
H2afb2S4R1M3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb2S4R1M3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb2S4R1M3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb2S4R1M3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb2S4R1M3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb2S4R1M3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.21■□□□□ 0.19
H2afb2S4R1M3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.21■□□□□ 0.19
H2afb2S4R1M3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.21■□□□□ 0.19
H2afb2S4R1M3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb2S4R1M3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb2S4R1M3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb2S4R1M3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2afb2S4R1M3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
H2afb2S4R1M3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
H2afb2S4R1M3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
H2afb2S4R1M3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
H2afb2S4R1M3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
H2afb2S4R1M3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
H2afb2S4R1M3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Gm5587-201ENSMUST00000206270 674 ntBASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb2S4R1M3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms