Protein–RNA interactions for Protein: Q9WUZ7

Sh3bgr, SH3 domain-binding glutamic acid-rich protein, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3bgrQ9WUZ7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3bgrQ9WUZ7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3bgrQ9WUZ7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3bgrQ9WUZ7 Timm23-208ENSMUST00000226683 750 ntBASIC18.6■□□□□ 0.57
Sh3bgrQ9WUZ7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Sh3bgrQ9WUZ7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3bgrQ9WUZ7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3bgrQ9WUZ7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3bgrQ9WUZ7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3bgrQ9WUZ7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3bgrQ9WUZ7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3bgrQ9WUZ7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3bgrQ9WUZ7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3bgrQ9WUZ7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Mir1199-201ENSMUST00000117015 119 ntBASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3bgrQ9WUZ7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3bgrQ9WUZ7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3bgrQ9WUZ7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Sh3bgrQ9WUZ7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3bgrQ9WUZ7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3bgrQ9WUZ7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3bgrQ9WUZ7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3bgrQ9WUZ7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Sh3bgrQ9WUZ7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Sh3bgrQ9WUZ7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3bgrQ9WUZ7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3bgrQ9WUZ7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Sh3bgrQ9WUZ7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3bgrQ9WUZ7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3bgrQ9WUZ7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3bgrQ9WUZ7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3bgrQ9WUZ7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3bgrQ9WUZ7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3bgrQ9WUZ7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3bgrQ9WUZ7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Sh3bgrQ9WUZ7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Sh3bgrQ9WUZ7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms