Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn2Q9R0A1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Actl10-202ENSMUST00000226583 1501 ntBASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn2Q9R0A1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Gm7213-201ENSMUST00000215977 950 ntBASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Gm10566-201ENSMUST00000086739 996 ntBASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn2Q9R0A1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Prob1-201ENSMUST00000097619 3021 ntBASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Gm22697-201ENSMUST00000175194 63 ntBASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn2Q9R0A1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Gm10013-201ENSMUST00000106074 672 ntBASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Clcn2Q9R0A1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms