Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx5Q9JL61 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx5Q9JL61 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx5Q9JL61 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx5Q9JL61 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Rfx5Q9JL61 Gm15165-201ENSMUST00000118140 502 ntBASIC17.1■□□□□ 0.33
Rfx5Q9JL61 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx5Q9JL61 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.1■□□□□ 0.33
Rfx5Q9JL61 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx5Q9JL61 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.1■□□□□ 0.33
Rfx5Q9JL61 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx5Q9JL61 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Rfx5Q9JL61 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx5Q9JL61 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.1■□□□□ 0.33
Rfx5Q9JL61 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx5Q9JL61 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx5Q9JL61 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.09■□□□□ 0.33
Rfx5Q9JL61 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx5Q9JL61 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx5Q9JL61 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx5Q9JL61 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx5Q9JL61 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx5Q9JL61 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx5Q9JL61 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx5Q9JL61 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx5Q9JL61 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx5Q9JL61 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx5Q9JL61 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rfx5Q9JL61 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rfx5Q9JL61 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rfx5Q9JL61 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx5Q9JL61 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.08■□□□□ 0.32
Rfx5Q9JL61 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx5Q9JL61 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx5Q9JL61 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx5Q9JL61 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx5Q9JL61 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx5Q9JL61 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx5Q9JL61 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx5Q9JL61 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Rfx5Q9JL61 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx5Q9JL61 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx5Q9JL61 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx5Q9JL61 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx5Q9JL61 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx5Q9JL61 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.06■□□□□ 0.32
Rfx5Q9JL61 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rfx5Q9JL61 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx5Q9JL61 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx5Q9JL61 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx5Q9JL61 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx5Q9JL61 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms