Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Gm5867-201ENSMUST00000063197 592 ntBASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim54Q9ERP3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim54Q9ERP3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim54Q9ERP3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim54Q9ERP3 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.49■□□□□ 0.39
Trim54Q9ERP3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.49■□□□□ 0.39
Trim54Q9ERP3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim54Q9ERP3 Gm1401-201ENSMUST00000122048 772 ntBASIC17.49■□□□□ 0.39
Trim54Q9ERP3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trim54Q9ERP3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim54Q9ERP3 Gm36967-201ENSMUST00000193814 266 ntBASIC17.49■□□□□ 0.39
Trim54Q9ERP3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim54Q9ERP3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim54Q9ERP3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.49■□□□□ 0.39
Trim54Q9ERP3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim54Q9ERP3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim54Q9ERP3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim54Q9ERP3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Gm13418-201ENSMUST00000119097 944 ntBASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Gm12350-201ENSMUST00000121208 462 ntBASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim54Q9ERP3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.47■□□□□ 0.39
Trim54Q9ERP3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim54Q9ERP3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim54Q9ERP3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim54Q9ERP3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim54Q9ERP3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim54Q9ERP3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim54Q9ERP3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim54Q9ERP3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.46■□□□□ 0.39
Trim54Q9ERP3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.46■□□□□ 0.39
Trim54Q9ERP3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim54Q9ERP3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms